Gene Sfri_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2447 
Symbol 
ID4279358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp2913259 
End bp2913858 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content42% 
IMG OID638135243 
Producthypothetical protein 
Protein accessionYP_751130 
Protein GI114563617 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGTCA AGTCGGCAAG CCAATCATTA AAGCCAAAAA CAGATCTCAG CCTGTTAGTC 
ACCAGTGCCG ACATTAAAAA GCAGCAAAGT GAACAAAGTG CATTACGTTA TTTAAATGGT 
TATCGTCCTG ACGTGGTCGA GAAAATCCGC CAACTCGTTG ATGCTAACGC CTTAGCTGCC 
CACTTTTTAA CACGCTACCC CAAAATACAC GACGTTCGTA CAGACAAAGC CTTATACGAT 
ATGGCGATAA CGTTAAAAAA TACCTATATG CGTCAATCGG ACCCATTAGC AAAAGTTATT 
TTTGACGAAA AAATCAGCGT AAGCCACCAT GCCCTAGGTT TGCATTCTTA TGTCAATCGC 
CGCCAAGGTA ATAAAGTTAA AGCCAAAAAT GAAATTCGAA TTGCAGCACA CTTAAAACAC 
GTTCCGTTTG AGCTATTACA AATGGTAGTA GTGCACGAAC TGGCCCACCT GCGTGAAAAA 
GAACACAACA AAGCTTTTTA TCAGTTATGC AGCTTTATGC TAGCAGATTA CCACCAGCTA 
GAATTTGATA TGCGAGTATG GTTAGTAGCT GAAGAAGTCG GACAATCGCC CTACGCTTAA
 
Protein sequence
MPVKSASQSL KPKTDLSLLV TSADIKKQQS EQSALRYLNG YRPDVVEKIR QLVDANALAA 
HFLTRYPKIH DVRTDKALYD MAITLKNTYM RQSDPLAKVI FDEKISVSHH ALGLHSYVNR 
RQGNKVKAKN EIRIAAHLKH VPFELLQMVV VHELAHLREK EHNKAFYQLC SFMLADYHQL 
EFDMRVWLVA EEVGQSPYA