Gene Sfri_2404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2404 
Symbol 
ID4279315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2868723 
End bp2870129 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content44% 
IMG OID638135200 
Productputative chaperone 
Protein accessionYP_751087 
Protein GI114563574 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000139082 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGTTG GATTTGATTA CGGCAGTGCC AACTGTGCGA TTGGGGTAAT GATTGATGAT 
GCGGTATCGT TATTACCATT ATCAACTCAT TCGGATTTTA TGCCTTCAAC GTTATACGCA
ATGGATCGCG AGCTTATTGC CGAGGCGGTA TACCAAGGAT TACCAGAACA CTTAAAAGCA
GAGTACTCTC ATTTGCGCAG TTCTCAGTTA ATGCGTGCAA AACTAATGCG TCATGAGCTT
GATCTGTCGC CCAATGAACA AGCTGTGTTT GTTGGCCAAG CTGCGATAGA TGCTTATTTA
GACATGCCTG AAGAAGGTTT TTATGTCCGC TCTCCAAAGT CTTTTTTAGG TGCCAACGGA
TTACGTGTTG AACAAATAGC CTTATTTGAA GACATTGTCA CCTTGATGAT GCAACATGTG
AAAACGTTAG CTGACAAAGC GTTAAACGCG AAATCGCTTA GCTCGGCCAG TCATGCGGTG
ATAGGCCGAC CAGTTAATTT CCAAGGCATA GGTGGCGAAG ACAGTAATCA ACAAGCTGAA
ACCATTTTAC GCCTTGCGGC AACTCGCTCA GGCTTTACCG ATGTTAGGTT TTTATTTGAA
CCCTTAGCCG CAGGTATGGA TTTTGAGTCA AACCTAAGCG ATGACAATAC CGTGTTAGTA
GTCGATGTTG GCGGTGGTAC GACAGATTGT TCAGTGGTGA AAATGGGGCC GTCTTACATT
AAACAACAAG ACCGCAGCCC AGACTGTTTT GGGCATTCAG GTCAACGGAT TGGTGGTAAC
GATTTAGATA TTGCGTTAGC GATGACTGGG TTGATGCCAA GTTTTGGTGC CGATACGTTA
ATGATTAACG GTAAACCTAT GCCAAGAACG CCTTTTTGGA ACGCGGTGGC CGTCAATGAT
ATTAGTGCCC AACGTGACTT TGTTAGTTTA CCCTCTCGTA AGTTAGTTGA GCAGCTAATC
AAAGAAGCGC AGCAGCCTGA ACTATTAGTT CGTTTACAAA AAGTACAAAA GAACCAAATG
AGTTATCAAG TGGTGCGCGA AGCTGAAGCG GCGAAAATTA GTTTGTCCGA CAATGACACC
ATTCAATGTT CGTTAGATTT TATTGAAAAG GGGCTGTTAG TCCCGTTAAC CGCAGCACAG
TTTGAGCAAG CCATTAACGA TCCTTTAGCG AAAGTTGAAG CGTTAATGAA ACAAGCAATG
CAAACGGCTA CAGCTAAAGC AGAGCAACAA GATTGTGATA TGCCAACCAC TCCTGATATT
GTGTATGTAA CAGGCGGTAC TGCTAGAAGC CCGGCAATAT ACAATAAAAT CGCTAGCGTG
TACCCCAATG CCAAAGTGGT GGTGGGTGAC CATTTTGGTT CGGTAACTGC AGGCTTAACC
CGTTGTGCTC AAAGTGCCTT TAACTAA
 
Protein sequence
MFVGFDYGSA NCAIGVMIDD AVSLLPLSTH SDFMPSTLYA MDRELIAEAV YQGLPEHLKA 
EYSHLRSSQL MRAKLMRHEL DLSPNEQAVF VGQAAIDAYL DMPEEGFYVR SPKSFLGANG
LRVEQIALFE DIVTLMMQHV KTLADKALNA KSLSSASHAV IGRPVNFQGI GGEDSNQQAE
TILRLAATRS GFTDVRFLFE PLAAGMDFES NLSDDNTVLV VDVGGGTTDC SVVKMGPSYI
KQQDRSPDCF GHSGQRIGGN DLDIALAMTG LMPSFGADTL MINGKPMPRT PFWNAVAVND
ISAQRDFVSL PSRKLVEQLI KEAQQPELLV RLQKVQKNQM SYQVVREAEA AKISLSDNDT
IQCSLDFIEK GLLVPLTAAQ FEQAINDPLA KVEALMKQAM QTATAKAEQQ DCDMPTTPDI
VYVTGGTARS PAIYNKIASV YPNAKVVVGD HFGSVTAGLT RCAQSAFN