Gene Sfri_2332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2332 
Symbol 
ID4279244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2776896 
End bp2778119 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content42% 
IMG OID638135129 
Producthypothetical protein 
Protein accessionYP_751016 
Protein GI114563503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0505999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTTA ATTTAAAAAT ATTATCCGTT GCGATATCAA TGGCGATAGT CCCAAGTTTA 
GCAGTGGCAG ATGAAGCCGC TGATGCTAAA ATTGCTAAAC TAGAGCAGCA GGTACAAACG
TTGCAGGCGC AGCAAAATGC AAGCCTAGCC GACAAGGTCA AATTTAACGG TTTTATTAGC
GGAGCCTATA TCAGCTCTGA TAATGATGCT GGCTACAATA ATGCTGATTC AAGTGCTAAC
TTTAGCGAAG ACAGTAAATT AGGTCTACAA GGGACATTTA ACATTTCTGA CAATACTCAA
GCAGTATTAC AGCTAATGAT GCGCGGTAAA TACGACTGGG AAGTTGAAGC TGAATGGGCC
TATTTATCCC ATCGCTTTGA CAACGGCGTT AAGATTCGTG GCGGTAAACT GCGTGTGCCT
TTATTTATGT ACTCTGATTA CTTAGATGTT GGATATGCAC AGCCTTTCGC GCGCCCACCA
CAAGAAGTAT ACGGTACCAT CCCGTTTTCA TCTTACACTG GTGCAGGTGT TTCTTATGAT
GTGGAATACG ATGACTCAAC ACTAACAATG CAAGCATTTG GTGGTGAGTC CGACGTTAAA
AACTCAGCGG TTGAATTAAG CAACCTTATG GGTGCTAACG TAAGTTGGAC TGATGAAATT
TGGACTTTAC GTGCTGTATA TGCACAAGCC AAATTAGATG GTCCAATTGT CTCAGAAGTA
ACAGTGCCTT TAGCCGCAGG TGTAAATACT CAAGCTAACT ATACCGTATT AGAACTTAAT
GATGAGAAAG GTTCATTCGT TGGGGTGGGT GCAAGTTACG ACAATGGTGA AGTGATTGCT
ATTACTGAAT GGACTCGTTC AGAAATTGAT AACGCTTACC CTGACACTGA TTCTGGTTAC
TTAACGCTGG GCTACCGTAT TAAGGAATTC ACACCTTACG CTACAGTTGC ATACATGAAG
ACTCAAGATA ATGATGAGCG TCTGCCACTA TCAACAGCGA CTGCTATTCA AATGGTTGCA
TTTAATGCTG AGCGCATGGC TTACAGTATT GGTTTACGTT GGGATGCTAT TGATAACGTC
GCGATAAAAT TTGATGTCAC TTATGCTGAA GATTTTGGTG ACACTTCAGG TGGATTCACG
GGCAACAGCA TCGACACATC AACAGGTAAG TTTACTTATG ATGACACCTT GATTTACACC
GTTAAATTCG ACGCAGTATT TTAA
 
Protein sequence
MQFNLKILSV AISMAIVPSL AVADEAADAK IAKLEQQVQT LQAQQNASLA DKVKFNGFIS 
GAYISSDNDA GYNNADSSAN FSEDSKLGLQ GTFNISDNTQ AVLQLMMRGK YDWEVEAEWA
YLSHRFDNGV KIRGGKLRVP LFMYSDYLDV GYAQPFARPP QEVYGTIPFS SYTGAGVSYD
VEYDDSTLTM QAFGGESDVK NSAVELSNLM GANVSWTDEI WTLRAVYAQA KLDGPIVSEV
TVPLAAGVNT QANYTVLELN DEKGSFVGVG ASYDNGEVIA ITEWTRSEID NAYPDTDSGY
LTLGYRIKEF TPYATVAYMK TQDNDERLPL STATAIQMVA FNAERMAYSI GLRWDAIDNV
AIKFDVTYAE DFGDTSGGFT GNSIDTSTGK FTYDDTLIYT VKFDAVF