Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2332 |
Symbol | |
ID | 4279244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2776896 |
End bp | 2778119 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638135129 |
Product | hypothetical protein |
Protein accession | YP_751016 |
Protein GI | 114563503 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0505999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAATTTA ATTTAAAAAT ATTATCCGTT GCGATATCAA TGGCGATAGT CCCAAGTTTA GCAGTGGCAG ATGAAGCCGC TGATGCTAAA ATTGCTAAAC TAGAGCAGCA GGTACAAACG TTGCAGGCGC AGCAAAATGC AAGCCTAGCC GACAAGGTCA AATTTAACGG TTTTATTAGC GGAGCCTATA TCAGCTCTGA TAATGATGCT GGCTACAATA ATGCTGATTC AAGTGCTAAC TTTAGCGAAG ACAGTAAATT AGGTCTACAA GGGACATTTA ACATTTCTGA CAATACTCAA GCAGTATTAC AGCTAATGAT GCGCGGTAAA TACGACTGGG AAGTTGAAGC TGAATGGGCC TATTTATCCC ATCGCTTTGA CAACGGCGTT AAGATTCGTG GCGGTAAACT GCGTGTGCCT TTATTTATGT ACTCTGATTA CTTAGATGTT GGATATGCAC AGCCTTTCGC GCGCCCACCA CAAGAAGTAT ACGGTACCAT CCCGTTTTCA TCTTACACTG GTGCAGGTGT TTCTTATGAT GTGGAATACG ATGACTCAAC ACTAACAATG CAAGCATTTG GTGGTGAGTC CGACGTTAAA AACTCAGCGG TTGAATTAAG CAACCTTATG GGTGCTAACG TAAGTTGGAC TGATGAAATT TGGACTTTAC GTGCTGTATA TGCACAAGCC AAATTAGATG GTCCAATTGT CTCAGAAGTA ACAGTGCCTT TAGCCGCAGG TGTAAATACT CAAGCTAACT ATACCGTATT AGAACTTAAT GATGAGAAAG GTTCATTCGT TGGGGTGGGT GCAAGTTACG ACAATGGTGA AGTGATTGCT ATTACTGAAT GGACTCGTTC AGAAATTGAT AACGCTTACC CTGACACTGA TTCTGGTTAC TTAACGCTGG GCTACCGTAT TAAGGAATTC ACACCTTACG CTACAGTTGC ATACATGAAG ACTCAAGATA ATGATGAGCG TCTGCCACTA TCAACAGCGA CTGCTATTCA AATGGTTGCA TTTAATGCTG AGCGCATGGC TTACAGTATT GGTTTACGTT GGGATGCTAT TGATAACGTC GCGATAAAAT TTGATGTCAC TTATGCTGAA GATTTTGGTG ACACTTCAGG TGGATTCACG GGCAACAGCA TCGACACATC AACAGGTAAG TTTACTTATG ATGACACCTT GATTTACACC GTTAAATTCG ACGCAGTATT TTAA
|
Protein sequence | MQFNLKILSV AISMAIVPSL AVADEAADAK IAKLEQQVQT LQAQQNASLA DKVKFNGFIS GAYISSDNDA GYNNADSSAN FSEDSKLGLQ GTFNISDNTQ AVLQLMMRGK YDWEVEAEWA YLSHRFDNGV KIRGGKLRVP LFMYSDYLDV GYAQPFARPP QEVYGTIPFS SYTGAGVSYD VEYDDSTLTM QAFGGESDVK NSAVELSNLM GANVSWTDEI WTLRAVYAQA KLDGPIVSEV TVPLAAGVNT QANYTVLELN DEKGSFVGVG ASYDNGEVIA ITEWTRSEID NAYPDTDSGY LTLGYRIKEF TPYATVAYMK TQDNDERLPL STATAIQMVA FNAERMAYSI GLRWDAIDNV AIKFDVTYAE DFGDTSGGFT GNSIDTSTGK FTYDDTLIYT VKFDAVF
|
| |