| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2319 |
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| Symbol | |
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| ID | 4279231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2762381 |
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| End bp | 2763067 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135116 |
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| Product | anti-ECFsigma factor, ChrR |
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| Protein accession | YP_751003 |
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| Protein GI | 114563490 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3806] Anti-sigma factor |
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| TIGRFAM ID | [TIGR02451] anti-sigma factor, putative, ChrR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAATT ACCACCCAGA TCAGCATTTG CTGTCTCTCC ATGCTAAAGG CGAGTTGCCG
CTATCTATGT CGATTGCTAT CTCCGCCCAT GCTGAATTGT GCCCTCATTG CCAGCAACAA
CTTGACCAGA TGACTATTGC GCTGTCTGAA CAACAGTTTG AGTCAGCAGT AAAAACTCAG
TCGGTAGACA CTAATGATAA TCATCAATTA GACGCACTAC TCGAGCAGCT ATTAAATTCG
ACCTTAGACA CTTTAGAGAT TGAACAGGCT AGTACGATTG ATACGATTGA AGATAACAGC
GTTAGTATTA AAGGTCAGCA TTATCCTCTG CCTAAGGTAT TTCGTAAGCA AATTAATGCT
TCTTGGCAAG GTATTGGTAA AGTCAGCCGC TTGAGACTCG ATACTGGAGA GCCACAAGCA
AGAGCAAGTT TGTTGCATAT CGCAGCCAAT GGTGAAATTC CTGAACACAC ACACAAAGGC
GCAGAGCTAA CATTACTGCT CGCTGGTGAG TTCAGCGACT GTTACAACAC CTACAAGCCA
GGTGATTTTA TGCTGCTTGA TAAAGAGCAC CAACATTCAC CAAAAACACT TGAAGGTTGT
TTGTGCTATA CCATTGTTGA TGCTCCGTTA TACTTCACTA AAGGTTTCAG TAAGTTACTA
AACCCAATTG GCGATTTACT TTACTAA
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| Protein sequence | MINYHPDQHL LSLHAKGELP LSMSIAISAH AELCPHCQQQ LDQMTIALSE QQFESAVKTQ
SVDTNDNHQL DALLEQLLNS TLDTLEIEQA STIDTIEDNS VSIKGQHYPL PKVFRKQINA
SWQGIGKVSR LRLDTGEPQA RASLLHIAAN GEIPEHTHKG AELTLLLAGE FSDCYNTYKP
GDFMLLDKEH QHSPKTLEGC LCYTIVDAPL YFTKGFSKLL NPIGDLLY
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