| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2288 |
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| Symbol | |
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| ID | 4279200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2728451 |
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| End bp | 2729917 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135085 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_750972 |
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| Protein GI | 114563459 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCAG AAACTACCAT ATTAGTCGCC ATTGGTCTTC CTCTAGTAGG AGCTCTGGCT
ATTTCTCTTG CAGGGCGAAT AGGCCCTAAT ATTCGCGAAG CTGCTACCGC TATTACATCT
GTTTTACTAA TCTGGGTTGT TTGGGGACTC ATTCCTACTC TTATGGAAGG CGGAAGACCC
TCAATAGAAG TAAGCGAGGT GATGCCTGGG CTAAGTATTG CATTTACTGT TGAACCTCTG
GGCATGCTAT TTGCGGCATT GGCATCTGGG CTTTGGCTTA TCAACTCGAT ATATTCCGTT
GGCTACATGC GCGGTAATAA AGAGAAAAAC CAAACTCGAT TTTATGTATG CTTCGCGTTA
GCTCTTTCAG CCACTGTTGG TGTTGCTTTC GCTGGCAATC TATTCACTCT CTTTTTATTC
TACGAATTAT TAACACTCTC GACATACCCT CTGGTAGCAC ATAAAGGCGA TGCAGCTACG
ATACGTTCGG CAAGGATTTA TCTGGGTGTT TTACTGAGTA CATCTATTGG TTTGTTCCTT
CCTGCAATCA TCTGGACTTA TACCGTGGCA GGAACAGGTG ATTTTACTGC CGGCGGGATC
CTCGCTGGTA AGTTGAATGA TCCAGAAATA GGGTTGCTTC TGGCACTATT TGTATTTGGT
ATCGGTAAAG CGGCTGTCAT GCCGATGCAT AAATGGCTAC CCGCCGCTAT GGTAGCCCCC
ACCCCAGTGA GTGCCTTACT ACATGCAGTT GCGGTAGTTA AAGCTGGTGT TTTTGCTATC
ACTAAGATAA TCATTTATAT ATTTGGGATT GAATATCTAT TTGAATCACC CAGCTCAGAA
TGGCTTTTAT ATGTTGCGGC TTTTACCATC ATTGTTGCTA GTCTTGTTGC AATGCGCCAA
ACCAACATCA AACGCCTGCT AGCCTACTCC ACTATTGCCC AGTTATCTTA TGTAGTCATG
GCCTCTGCCA TTCTCAAACC ACTCGCAGAG GTTGGCGCCG CCTTACATAT GGTCGCTCAT
GCTTTTGGTA AAATCACATT GTTCTTTGCT GCTGGCGCAA TTTATGTTGC CTCTAAAAAG
ACCGAAATTC ATCAATTACG TGGTATTGGT AGACGTATGC CATGGACAAT GGCGGCGTTT
ACAATTGGTG CATTAAGTAT GATTGGTGTC CCTCCCACTG CGGGGTTCGT CTCCAAATGG
TACATTTTGG CCGGAGCTTT CGAAGCTAAC AATCTAGTGG CAGTATTCAC CATAATTGTC
AGTACCCTTC TTAATGCAGC TTACTTTTTG CCTATTTTAT ACATAGTTTG GTTTGAGCAC
GAAAAAGAAG GTGACAAGGA ACACGGCGAA GCACCGTTTT TAGCTGTGTT GGCATTGACT
CTGACCGCCA TACTGACACT CGCTTTCTTT TTGTTTAACG GTCCAGTAAT TGAATTGGCA
AGCCAAGTTG TTAAGGGGCT CAGTTAA
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| Protein sequence | MTPETTILVA IGLPLVGALA ISLAGRIGPN IREAATAITS VLLIWVVWGL IPTLMEGGRP
SIEVSEVMPG LSIAFTVEPL GMLFAALASG LWLINSIYSV GYMRGNKEKN QTRFYVCFAL
ALSATVGVAF AGNLFTLFLF YELLTLSTYP LVAHKGDAAT IRSARIYLGV LLSTSIGLFL
PAIIWTYTVA GTGDFTAGGI LAGKLNDPEI GLLLALFVFG IGKAAVMPMH KWLPAAMVAP
TPVSALLHAV AVVKAGVFAI TKIIIYIFGI EYLFESPSSE WLLYVAAFTI IVASLVAMRQ
TNIKRLLAYS TIAQLSYVVM ASAILKPLAE VGAALHMVAH AFGKITLFFA AGAIYVASKK
TEIHQLRGIG RRMPWTMAAF TIGALSMIGV PPTAGFVSKW YILAGAFEAN NLVAVFTIIV
STLLNAAYFL PILYIVWFEH EKEGDKEHGE APFLAVLALT LTAILTLAFF LFNGPVIELA
SQVVKGLS
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