| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2278 |
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| Symbol | |
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| ID | 4279190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2722581 |
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| End bp | 2722985 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135075 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_750962 |
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| Protein GI | 114563449 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.369324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTTTTA ATGATTTATT TAGACTCAGT TCTCACGCGG TCATAACCAA TACAGTAGGG
GAAGTCTTGC TGTTAAAAGC CACTTATGGT GACAAACATT GGGGCTTGCC GGGTGGTGGG
CTTGACCCTA ATGAAACGAT TCATCAGGCA TTACAACGTG AATGTTTTGA AGAGTTGGGC
TGTGAGGTGG ATGTGCAATA TCTGTCTGGA GTGTATTTTC ACAGTGCGTA TCAATCGCAA
GCGTTTATCT TTCGCTGCGA GTTACCCAAA GGTGCCCAAA TAAGTTTAAG CGATGAACAC
AGCGAGTACG CTTTCGTTGC TGTTACTGAA TTATCTAACA TTCAGCAACA GCGAGTAAGC
GAATGTTTAG CATTCAGTGG TGTGGTTCGC AGCGCGGCTT TCTAA
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| Protein sequence | MAFNDLFRLS SHAVITNTVG EVLLLKATYG DKHWGLPGGG LDPNETIHQA LQRECFEELG
CEVDVQYLSG VYFHSAYQSQ AFIFRCELPK GAQISLSDEH SEYAFVAVTE LSNIQQQRVS
ECLAFSGVVR SAAF
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