| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2242 |
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| Symbol | |
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| ID | 4279154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2686944 |
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| End bp | 2687777 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135039 |
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| Product | aminotransferase, class IV |
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| Protein accession | YP_750926 |
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| Protein GI | 114563413 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACGG TTTGGGTTAA TCACGTTGAA AACGGACTAA TAAGTCCATT TGATCGTGGT
GTTGCTTATG GTGATGGTGT GTTTGCAACC ATGCGCACAG CATCATCTGA TATGCCTGCA
GGGATCCTAT TCCTTGACGG GCATATTTCT CGTTTGCTGC AAAGTTGCGA GCGCCTAAGT
ATTAAGTGGC ATCCAAGCGA CTTATTAATA CAACAATTGA TCCTACTCGC CCAACAATAC
CCACAACATT GTATAAAGCT ATTGCTGACG CGTGGAGTCG GTGGCCGTGG TTATCAGGCT
CCTTTGAGCA TAAACGTTAC AGAAGTCGTG TCAGTGCATC CCATTCCTGA GCATTATCTT
GATTGGCAGC AAAGTGGTAT CTCGCTAGCA TCATCACCCA TATGTCTTGG CAGGCAACCA
CTTCTGGCTG GAATAAAACA CCTTAATAGA TTGGAACAGG TGCTCATAAA GTCACAACCG
CTGCCTAGTA CTCATCAAGA TTGGTTAGTG TTTGACTGTG ACGGTAATGT GATAGAGTCA
TCCATGGCCA ACATTTTTGT AGTCAAAAAT GGTCATGTGT TTACCCCAGC AATAACCCAT
GCAGGTGTAA GTGGTGTGAT GCGTGAGACA TTAATTGATA CTCTGCTCTG TCAGGGCTTA
TCTGTTATGG CTACACAATT AACACTTGGT GATATTCAGG CAGCGGACAA TATATTTATA
ACAAACAGTT TATTTGGCAT TGTTGATGTA ACTGCCATTG ACGATTTTCA ATTTAGCCGT
TGGACGCAAA CATCGCGATT CAGGCACATT TTGAGTGTGA ATTTATCATC ATGA
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| Protein sequence | MATVWVNHVE NGLISPFDRG VAYGDGVFAT MRTASSDMPA GILFLDGHIS RLLQSCERLS
IKWHPSDLLI QQLILLAQQY PQHCIKLLLT RGVGGRGYQA PLSINVTEVV SVHPIPEHYL
DWQQSGISLA SSPICLGRQP LLAGIKHLNR LEQVLIKSQP LPSTHQDWLV FDCDGNVIES
SMANIFVVKN GHVFTPAITH AGVSGVMRET LIDTLLCQGL SVMATQLTLG DIQAADNIFI
TNSLFGIVDV TAIDDFQFSR WTQTSRFRHI LSVNLSS
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