| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2213 |
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| Symbol | |
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| ID | 4279125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2648356 |
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| End bp | 2649336 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135010 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_750897 |
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| Protein GI | 114563384 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTA TTCATAGTTG TGTGTTGCAA ATTCATTTAA CAATAGAGAC CAAAATGGCA
GATACCAAAG CAATTCAGCA GCTTGACCTT AATTTGTTAA AAATATTTGA AGCTCTTTAT
TCGGAGCAAA ATATGACTTT AGCGTCAAAG TCGTTGTTTA TAACGCCTTC AGCAGTGAGC
CATGCGATAA AACGATTACG TTTAGTGTTA AACGACCCGC TGTTTGTACG CCAAGGTCTG
CAAATGCAAC CAACAGCAGC TTGTCAACGT ATGGCTCCGC AACTTATTAG TGCGCTAAAT
CGAATAAGGC AAGTACTGCA GCAATGTGGT GAATTTGACC CGCTTACTAC GGAGCAAACT
TTTAAAATAG CCATTCATGA AGCGCTAGAA AGCCAAATAA TGCCAACGCT GATTAAGCAA
GTTGTGAAGT TAATTCCGCA TGCGAAAATA GCCAGTATGT CATTATCTCG GGAAAATATA
GCGCGTCAGT TAGCCAATGG GGAGGTGGAT TTAGCCATTG ATGTTGCGAG AGCGGTGAAT
GCCCCTTTAG CTCACAAAAC CCTATTGTCA GATCCATTTT GTGTGTTGAT AGACCGTCGA
CAACATGCAA TGCATTTAGA GCCTAGTACC AAATTGACTC CGACTGATTA TGCTAATGCT
GAACATGTAG CCGTATCAAG CAGACCTATT GGTCGAGTGA TGGAAGATAT ATTGTTACAA
CAACAAGGTG TAAATCGGCA CATTAAATAC CGATGCCAGA GTTACCAAAC CGCTGCTAAA
ATTGTCATCG GGTCGCCTTT AATGTTGACC TTACCGCGCT CTATAGCGGA GCAGTTTATA
CATCCAGATT TACATGTGTG CACCATGCCA TTTGAACTAC CGGACATTGA TACTCATTTA
TACTGGCACA TGAATACTGA AACGGATCCC GCATTTGTTT GGTTAAGAGC ACAAATTGAG
ATGGCGATCA TTGCAGAATA A
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| Protein sequence | MNTIHSCVLQ IHLTIETKMA DTKAIQQLDL NLLKIFEALY SEQNMTLASK SLFITPSAVS
HAIKRLRLVL NDPLFVRQGL QMQPTAACQR MAPQLISALN RIRQVLQQCG EFDPLTTEQT
FKIAIHEALE SQIMPTLIKQ VVKLIPHAKI ASMSLSRENI ARQLANGEVD LAIDVARAVN
APLAHKTLLS DPFCVLIDRR QHAMHLEPST KLTPTDYANA EHVAVSSRPI GRVMEDILLQ
QQGVNRHIKY RCQSYQTAAK IVIGSPLMLT LPRSIAEQFI HPDLHVCTMP FELPDIDTHL
YWHMNTETDP AFVWLRAQIE MAIIAE
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