| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2187 |
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| Symbol | |
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| ID | 4279099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2615696 |
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| End bp | 2616688 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134982 |
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| Product | putative methyltransferase |
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| Protein accession | YP_750871 |
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| Protein GI | 114563358 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG0500] SAM-dependent methyltransferases |
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| TIGRFAM ID | [TIGR00452] methyltransferase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000631484 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAATT TTAGCTCTTT TTATAAAGAC ATTGCTGATT CAAACCTACA ACACTGGTTA
GAAACTTTAC CGGCAATTTT AGGTAAATGG CAACGAGATC ATAAACACGG TAATTTACCT
AAATGGGAAA AAGTGCTCAA TAAATTACAT TATCCTCAAC CGGATAATAT CGATTTTAGC
AGCAGTGTAA CTATTGGAAC CGGAGAACAA CTCAGCCCCG GACAAGTTGA AAAACTCACT
AATTTACTGG AGGTGTTTCA ACCATGGCGT AAAGGTCCAT TTTCCGTTCA TGGTATTCAA
ATTGACACTG AATGGCGCAG TGATTGGAAA TGGGATCGAG TCAAAAATTT TATTTCGCCA
TTAAAAAATC GCACTGTGTT AGATGTGGGT TGTGGTAGTG GCTACCACAT GTGGCGGATG
TTAGGTGATG GTGCAACTCG CGTTGTAGGC ATTGATCCTT CACCGTTATT TTTATGCCAA
TTTGAAGCAA TCAAACGAGT GGCCGGCAAT CAGCACCCAG TATATTTGTT GCCTCTGGGC
ATAGAAGAAT TACCTCCATT AGATGCCTTT GATACGGTGT TTTCTATGGG CGTGCTCTAC
CATCGTCGCT CACCGATAGA CCATTTACTA CAATTACGCG ACCAATTAAG AGTCGGTGGT
GAACTGGTAC TTGAAACACT GGTGATTGAT GGCGATGAAA ATGCAGTACT TGTTCCACAA
GATAGATATG GCAAAATGAA CAACGTTTGG TTTATACCAT CTGTTGCTGC CTTAATGTTA
TGGTTAAAGA AATGTGAGTT TATTGATATT CGTTGTGTTG ACATCGATAT CACCTCACTG
GCAGAACAAC GCAGCACCCA CTGGATGAAA AATGAATCTC TAGTCGATTA TCTCGATCCT
AATGATGTGA GTTTAACCGT AGAAGGTTAT CCCGCGCCCA AGAGGGCCAT CATTATTGCA
ACAAAGAACC AACCGAATCA CGATCTAGTA TAA
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| Protein sequence | MINFSSFYKD IADSNLQHWL ETLPAILGKW QRDHKHGNLP KWEKVLNKLH YPQPDNIDFS
SSVTIGTGEQ LSPGQVEKLT NLLEVFQPWR KGPFSVHGIQ IDTEWRSDWK WDRVKNFISP
LKNRTVLDVG CGSGYHMWRM LGDGATRVVG IDPSPLFLCQ FEAIKRVAGN QHPVYLLPLG
IEELPPLDAF DTVFSMGVLY HRRSPIDHLL QLRDQLRVGG ELVLETLVID GDENAVLVPQ
DRYGKMNNVW FIPSVAALML WLKKCEFIDI RCVDIDITSL AEQRSTHWMK NESLVDYLDP
NDVSLTVEGY PAPKRAIIIA TKNQPNHDLV
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