| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2150 |
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| Symbol | |
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| ID | 4279062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2557909 |
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| End bp | 2558571 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134939 |
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| Product | two component transcriptional regulator, winged helix family protein |
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| Protein accession | YP_750834 |
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| Protein GI | 114563321 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.175243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAATA TCCTATTCAT TGAACATACC CTTTCCGATA AAAGTGACGT AGGTCGACAG
TTAAATGAGC AGGGCTACAG TATTCATCGG GTTAATAATG CCTTTGATGC GTTGATCCAA
ATGGAGACTC TGCAGCTTGA AGCCATATTA TTAGATTTTT CGGTGCCCAA AATGGAGTCA
TTTTGGTTGC TGGTCGCACG ACAAAGCCGA ACCCCCATTA TTGTATTAGC AGAAAGTAAT
AGCGAGCTTG AGCGTATTAA TGCGTTAGAG TTAGGCGCCG ACGATTACCT CACTAGACCG
ATTAATATCC GCGAATTGCA GTTACGTCTT AATGTACTCC ATCGACGATG CCAAGCACCG
ATTAATGATG ATGTTAATGA CAGTATTGGT TTTGATGATA CCTCCTATAC CATTAGTTTT
GCCGATAAGT CGCTCGTGTT GACGCAAACA GAATATCGAT TATTCAAATA TTTATTTGAT
AGGCAAGGCG AGGTGGTTAC TAAAGAAGAA TTACAACTTC GAGTGCTGCA TAAAGAACTT
GGACGTTTTG ACCGCAATTT AGACATGCAT ATCAGCAATA CACGCCGTAA ATTAGTCAAA
CGTAATTTAC CACGAGAACT AATTAATACC GTTCGCGGTC AAGGTTACAG CTTTAGCTTT
TAA
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| Protein sequence | MKNILFIEHT LSDKSDVGRQ LNEQGYSIHR VNNAFDALIQ METLQLEAIL LDFSVPKMES
FWLLVARQSR TPIIVLAESN SELERINALE LGADDYLTRP INIRELQLRL NVLHRRCQAP
INDDVNDSIG FDDTSYTISF ADKSLVLTQT EYRLFKYLFD RQGEVVTKEE LQLRVLHKEL
GRFDRNLDMH ISNTRRKLVK RNLPRELINT VRGQGYSFSF
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