| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2139 |
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| Symbol | |
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| ID | 4279051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2546472 |
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| End bp | 2547335 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134928 |
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| Product | protein of unknown function RIO1 |
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| Protein accession | YP_750823 |
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| Protein GI | 114563310 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[T] Signal transduction mechanisms |
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| COG ID | [COG1718] Serine/threonine protein kinase involved in cell cycle control |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.262343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGC CTATACGATT ACAACCACTG GTTGACGATG GTCTCGTCGA TGAAGTGATA
AGCCAACTCA TGAGTGGCAA AGAAGCTACG GTCTATATGA TCAGATGTGG CGATGCGATT
CGCTGCGCCA AAGTGTATAA GGAAGCCACT AAGCGCAGTT TTAAAAAAGC AGCACAATAT
CAAGAAGGTC GAAAAACTAA AAACAGTCGT CGTGGTAGAG CCATGGAAAA GGGTTCTAAA
TACGGTCGTG AAGAACAAGA AAAAGCTTGG CAGAATGCCG AGGTCGACGC GTTATATAAA
TGCGCCGCAG CTAAAATTAG AGTACCTGTA CCTTATGGCT GCTTTGATGG GGTGTTATTG
ATGGAGTTGA TCACCAATGT TCATGGTGAT GTAGCACCTC GATTAAATGA CGTCACCCAG
ATGAGCGTAG AACAAGCACA AACACAGCAT TACGTCATGA TGGGTTATGT AGTACGGATG
TTATGTGCAG GTATTGTTCA TGGCGATTTA TCAGAATTTA ACGTGCTCGT AGATCAGAAT
GGACCGGTGA TCATTGACCT GCCCCAAGCT GTTGATGCAT CAGCAAACAA TAATGCCAAA
GCGATGTTAT TTCGTGATGT GAATAATATG ACAGACTATT ATTCTCAATT TGCCCCAGAA
TTAGCAGCAA CAAAATATGC TAAAGAAATG TGGGCCTTGT ATGAACAAGG TGAATTAACG
CCGGAAACAC AATTGACCGG TTTGTTTGAA GAAGACACGA CCGCAGCTGA TGTCGATTCG
GTATTAGAAG AAATCAACGC TGCATTTGAA GAAGCGCAAG AAAGACGCGA GCGCATGAGT
GATGCAAACA ACGACGAGTA TTAA
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| Protein sequence | MKTPIRLQPL VDDGLVDEVI SQLMSGKEAT VYMIRCGDAI RCAKVYKEAT KRSFKKAAQY
QEGRKTKNSR RGRAMEKGSK YGREEQEKAW QNAEVDALYK CAAAKIRVPV PYGCFDGVLL
MELITNVHGD VAPRLNDVTQ MSVEQAQTQH YVMMGYVVRM LCAGIVHGDL SEFNVLVDQN
GPVIIDLPQA VDASANNNAK AMLFRDVNNM TDYYSQFAPE LAATKYAKEM WALYEQGELT
PETQLTGLFE EDTTAADVDS VLEEINAAFE EAQERRERMS DANNDEY
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