| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2099 |
|---|
| Symbol | |
|---|
| ID | 4279011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 2498533 |
|---|
| End bp | 2499633 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638134888 |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | YP_750783 |
|---|
| Protein GI | 114563270 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.732064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGATT CACTATTTCA ACCGATACAA CTCGGTAAAA TTTCTTTAAA AAATCGTATT
GTTATGCCTC CAATGACGCG ATCGCGCGCC TCTCAGCCAG GTAATGTTGC CAACGATATG
ATGGCTGAAT ATTATGCTCA ACGCGCTTCA GCGGGCCTTA TTGTGAGTGA AGGTACCCAG
ATTTCAGCCA TGGGCCAAGG TTATGCTTGG ACGCCAGGTA TTTATTCTCC AGAACAAATA
GCCGGATGGC AAAAAGTCAC CAACGCTGTG CATGCAAAAG GCGGCACTAT CTTCGCCCAA
CTTTGGCATG TTGGCCGCGT GACTCACCCA GATAATATCA ATGGCAAGCA ACCTATTTCG
TCTTCTGCAC TAAAAGCACA AAATGTAAAA GTGTTTGTGG ATAATGGTAC TGACGAACCT
GGTTTTGTTG ACGTGGTTGT GGCGCGTGAA ATGTCTAAAG CTGACATTGA ACATGTTATT
GGTGAATATC GCCAAGCGGC GTTAAATGCT ATTGAAGCAG GTTTTGATGG CATAGAATTG
CATGCTGCGA ACGGTTATTT AATTAACCAG TTTATCGATT CTGAAGCGAA TAATCGTATT
GACGAATATG GTGGTAGTAT GGAAAACCGC CTGCGTTTCT TAGGTGAAGT GGTTGGTGCA
ATGACTGATG CCATCGGTGC TGATCGTGTT GGTGTTCGTC TTGCGCCATT TACATCTTTA
AATGGTACTG TTGATGCAAC CCCCATTGCA ACCTACACCG CAGCGGCAGT ATTACTTAAC
AGTTTAAATG TGGTTTACAT TCATTTTGCT GAAGTCGATT GGGATGATGC CCCGGAGACT
CCTGCAGCGT TTAAAGATGC CGTTCGAGCG GCCTATAAAG GGATACTCAT TTATGCTGGT
CGTTACGACG GTGAAAAAGG CACACAGGCA ATTAACGATG GCCTAGCTGA TATGATTGGT
TTTGGTCGAC CATTTGTATC TAATCCTGAT TTGCCAAACC GCATTAAGCA TGGTTATCCA
TTAGCGGTGC ACACACCAGA GACATTATTT GGTGGATCTG AAAAAGGCTT AACTGATTAC
CCACAATACA GCCCAAGTTA A
|
|---|
| Protein sequence | MKDSLFQPIQ LGKISLKNRI VMPPMTRSRA SQPGNVANDM MAEYYAQRAS AGLIVSEGTQ
ISAMGQGYAW TPGIYSPEQI AGWQKVTNAV HAKGGTIFAQ LWHVGRVTHP DNINGKQPIS
SSALKAQNVK VFVDNGTDEP GFVDVVVARE MSKADIEHVI GEYRQAALNA IEAGFDGIEL
HAANGYLINQ FIDSEANNRI DEYGGSMENR LRFLGEVVGA MTDAIGADRV GVRLAPFTSL
NGTVDATPIA TYTAAAVLLN SLNVVYIHFA EVDWDDAPET PAAFKDAVRA AYKGILIYAG
RYDGEKGTQA INDGLADMIG FGRPFVSNPD LPNRIKHGYP LAVHTPETLF GGSEKGLTDY
PQYSPS
|
|---|
| |