| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2073 |
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| Symbol | |
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| ID | 4278985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2457466 |
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| End bp | 2458377 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134862 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_750757 |
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| Protein GI | 114563244 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTG ATTTGAATTT GTTTGTGGTT TTCGATGCGA TTTATTGTGA GGGAAACATA
ACCAAAGCAG CGTCAGTGCT AAATTTATCG CAACCTGCGG TGAGTCATTC ATTAGGTAAA
CTGCGGACTC ACTTTGATGA TGCTTTGTTT ATAAGACAAG GTAATGAAAT GCGCCCAACA
CCAGTGGCCA AGAACGTCAT TGATGACGTG CGTGAAGCAT TACATCAGTT ACAAGTGTGT
TTGGTACAGT CTCGACAATT CGAACCATTA ACTTCACGTA AGAGTTTTTC ATTGTCATTG
CATGGTTCGC TAGAACCCTA CTATTTACCG ATACTGCAAC AGAGTTTGTC TTTAGAGTCT
CCGTCCATCA ATTTAAGCAG TAATAAAAGA GTTAGACGCA CAGAACTGGA AAACAAACTG
GCCAGTGGTG ATATTGACTT GGCAATTGAT ACACTTATAC CTGTTAGCAA TAACATTATG
CATACTCAAT TAGAGCTTGA CCAACTTGTT GTTGTTGCAC GTAAAAACCA TCCAGCAATG
AATCCTGATC TTGATTTAGC AACCTACCTT AAACTCGACC ATGTGCTGGT TTCATCTCGC
TCCACTGGCC CTAGCCTAGA AGATTTTGAA TTATCACGTA TTGGCTTACA CCGTAAAATT
TCATTACGTT GCCAACATGC ATTATCAGCC TGCCGGGTCA TTTTAAATAA TGACATGTTG
CTAACACTGC CCAAAACCGC AGCAGCTATG TATAGCAAGA TGCTTGATAT TGATATACAC
CCAATGCCGG TTGAATTACC TGATATTGGT GTTCATTTAT ATTGGCATGT TAACGTTGAC
AAAGAGCCAG CCAACAAATG GCTTAGAAAC AAGATGATTA TTGCGGCAAC TGAAACTAAA
AGACCGACTT AA
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| Protein sequence | MKIDLNLFVV FDAIYCEGNI TKAASVLNLS QPAVSHSLGK LRTHFDDALF IRQGNEMRPT
PVAKNVIDDV REALHQLQVC LVQSRQFEPL TSRKSFSLSL HGSLEPYYLP ILQQSLSLES
PSINLSSNKR VRRTELENKL ASGDIDLAID TLIPVSNNIM HTQLELDQLV VVARKNHPAM
NPDLDLATYL KLDHVLVSSR STGPSLEDFE LSRIGLHRKI SLRCQHALSA CRVILNNDML
LTLPKTAAAM YSKMLDIDIH PMPVELPDIG VHLYWHVNVD KEPANKWLRN KMIIAATETK
RPT
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