Gene Sfri_2070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2070 
Symbol 
ID4278982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2454321 
End bp2455445 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content43% 
IMG OID638134859 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_750754 
Protein GI114563241 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGTG ACAAAAACAC CAGTATCGAT AAGTTATTTG AATCATTTAA CACTAAATCG 
TTATCACTTA AAAACAAAAC CGTTATGGCG CCAATGACAC GTGCGTTTTC ACCAAATTAC
ATTCCTAATA AAGAAGTTGC AGCATATTAC CGCAGACGTG CTGAGGGTGA CGTGGGATTA
ATTATTACCG AAGGCACATT TATTTCTCAT AAAGCCGCTA ACGGTTATGA AAACGTACCC
GCTATTTATG GCGAAGCAGC ATTAGCTGGC TGGAAACACG TAGTGGATGA AGTGCATGCG
GCAGGTGGCA AAATTGCACC ACAGCTTTGG CATGTAGGTT CTGTAAGAAA ACCCGGCGTT
GGCCCAGACA AAGAAGCCCC AGCTTATAGT CCATCTGGCT TGTATAAACC CGGTGCTAAA
AATGGCGTTG CTATGTCCCA GGATGATATC AACGAAGTAG TTGCTTCTTT TGCACAAGCC
GCATTGGATG CCAAAAACAT TGGCTTTGAT GCCATTGAAG TACACGGCGC CCACGGTTAC
TTAGTTGATC AATTCTTTTG GGAAGGCACG AACCAACGTG ATGACCAATA CGGTGGATCG
TTAGAAAATC GTACTCGCTT TGGTGTTGAA ATTGTAAAAG CGATTCGCGC CGCTGTGGGT
GATGACTTTA CGATTATCTT CCGTTTTTCA CAGTGGAAAC AACAAGATTA CAGCGCAAAA
CTGTGTCAAA CCCCTGCAGA GTTAGCAACA TTTTTAGGTT TGCTAAGCGA TGCTGGCGTC
GATATTTTCC ATGCCAGTAC ACGTCGTTTT TGGGTGCCTG AATTTGAAGG TTCAGACCTT
AACTTAGCGG GTTGGACAAA AAAGCTGACC AATAAGCCTG TTATTACTGT TGGCAATGTG
GGGTTAGACG CTGACTTTAT TGGCGAAGGT AATGCCGATT TATCGGGTAC GTCTAATCCA
ACTGGCATTG ATGAGTTATT AGTACGTTTA AACAATAACG AATTTGATTT AGTCGCTGTC
GGTCGCGCCT TATTAGTCGA TCCGCAGTGG GTCAATAAAA TTAAACACAA AGCCATCGCG
GATATTAAAC CGTTTAACAA AAAATCATTA ACGTCACTCA GTTAA
 
Protein sequence
MNSDKNTSID KLFESFNTKS LSLKNKTVMA PMTRAFSPNY IPNKEVAAYY RRRAEGDVGL 
IITEGTFISH KAANGYENVP AIYGEAALAG WKHVVDEVHA AGGKIAPQLW HVGSVRKPGV
GPDKEAPAYS PSGLYKPGAK NGVAMSQDDI NEVVASFAQA ALDAKNIGFD AIEVHGAHGY
LVDQFFWEGT NQRDDQYGGS LENRTRFGVE IVKAIRAAVG DDFTIIFRFS QWKQQDYSAK
LCQTPAELAT FLGLLSDAGV DIFHASTRRF WVPEFEGSDL NLAGWTKKLT NKPVITVGNV
GLDADFIGEG NADLSGTSNP TGIDELLVRL NNNEFDLVAV GRALLVDPQW VNKIKHKAIA
DIKPFNKKSL TSLS