| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2064 |
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| Symbol | |
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| ID | 4278976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2447103 |
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| End bp | 2448023 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134853 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_750748 |
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| Protein GI | 114563235 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCA GTTTTGCAGG ACAAGTAGCC ATAGTCACAG GTGCCGGTAA TGGTTTAGGC
CGCTCACATG CATTGGAACT CGCTAAACGT GGCGCCAAAG TCGTGGTAAA TGATTTAGGT
GGCGCACGCG ATGGTAGCGG TGCATCTTCT GCAGCATCAC AAGATGTGGT TCGTTTAATT
GAAGAAATGG GCGGTGAAGC CATTAGTCAT GGCGCAAACG TAGCCAACTT TGATGAAGTA
CAAGACATGG TGCAGCAAAC CATGGACAAG TGGGGCCGTG TCGACATTTT AATTAATAAT
GCAGGGATTT TACGCGACAA ATCGTTTTCT AAAATGACCT TAGATGACTT TAAGCTAGTG
ATGGATGTAC ACGTGATGGG CTCAGTAAAC TGCACTAAAG CGGTATGGGA AATCATGAAG
CAGCAAAATT ATGGCCGCAT TGTGATGACC ACATCGTCAA GCGGCATGTA CGGTAACTTT
GGTCAGTCTA ACTATGGTGC AGCCAAAATG GCAGTGCTTG GGTTAATGAA TACCTTAGTG
CTTGAAGGTG CCAAAAATAA CATCCACATC AATGCGTTGG CCCCAACAGC GGGCACGCGT
ATGACAGAAG ATTTAATGCC AGAAGAAATC GTTAAAGCCT TCGCGCCAGA GGCTGTTACT
GCTGGCATGC TGACCTTGTG TGATGAACTT GCGCCAACTC GGTTTATTTT ATGTGCTGGT
GCGGGCGGTT ATTCAAGTGC CAGTATTTTT GAAACCGAAG GCTGTTTTAT TCCTAAAGCA
TCACAAACCC CAGAAGCGGT GCGTGACAAC TGGGCGCAAC TCACTGCGCA AGATAATCAA
AAAGCATTGA AGTCTGGAGC TCAACAAGGC GAGAAGTTTG TGATGAAGGC GATGGCTTTT
ATGAAGTCGC AACAGCAATA A
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| Protein sequence | MTISFAGQVA IVTGAGNGLG RSHALELAKR GAKVVVNDLG GARDGSGASS AASQDVVRLI
EEMGGEAISH GANVANFDEV QDMVQQTMDK WGRVDILINN AGILRDKSFS KMTLDDFKLV
MDVHVMGSVN CTKAVWEIMK QQNYGRIVMT TSSSGMYGNF GQSNYGAAKM AVLGLMNTLV
LEGAKNNIHI NALAPTAGTR MTEDLMPEEI VKAFAPEAVT AGMLTLCDEL APTRFILCAG
AGGYSSASIF ETEGCFIPKA SQTPEAVRDN WAQLTAQDNQ KALKSGAQQG EKFVMKAMAF
MKSQQQ
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