Gene Sfri_2045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2045 
Symbol 
ID4278957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp2423833 
End bp2424525 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content44% 
IMG OID638134834 
Productenoyl-CoA hydratase 
Protein accessionYP_750729 
Protein GI114563216 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.159168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGA TCACCGTAGT AATCGAAAAC AATGTACATG TTATTACCCT GAACAATGGC 
AAAGTGAATG CAATATCGCC TGAAGTCATC GCTCAAATTA ACAGTGCATT AGACCACGCA 
GAACAACAAA ATGCGGTTGT CATATTAACT GGCCAACCTG GTATTTTATC TGGCGGTTAC 
GATCTTAAAA CCATGAAGCA AAGTTCACAA GCTGCAATTG CTTTGGTCAC TGCGGGCTCA 
ACATTAGCTC GCAGAATGCT GTCATTCCCA ACACCGATTA TTGGTGCCTG TTCAGGCCAT 
GCCATTGCTA AAGGCGCATT TTTACTACTC AGCTGTGACT ACCGTATTGG CAGCACAGGG 
CCATTTAAAA TTGGCCTAAA CGAAGTGGCT ATTGGGATGA CAATGCATCA GGCTGGCATT 
GAAATCGCGC GTAATCGTAT TCCGCAAAAT TATCTGTCGC GCGCGGTAAT CAATGCTGAA 
TTGTTTGCAC CAGAACAAGC TGTATTGGCA GGTTTTCTTG ATCAAGTGGT TGAGCCAGAA 
CAACTCATGG ACACTGCACA CGCCGTGGCT AAACACATGC AAACACTGAA CATGCCTGCG 
CATTTGGGAA CCAAGTTAAA GGAGCGTCAG TCTATTCTTG CCTCTTTGGA TGCAGCAATA 
GAACAAGATA AGCTTATTAC ATTGAATTTA TAA
 
Protein sequence
MELITVVIEN NVHVITLNNG KVNAISPEVI AQINSALDHA EQQNAVVILT GQPGILSGGY 
DLKTMKQSSQ AAIALVTAGS TLARRMLSFP TPIIGACSGH AIAKGAFLLL SCDYRIGSTG 
PFKIGLNEVA IGMTMHQAGI EIARNRIPQN YLSRAVINAE LFAPEQAVLA GFLDQVVEPE 
QLMDTAHAVA KHMQTLNMPA HLGTKLKERQ SILASLDAAI EQDKLITLNL