Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1993 |
Symbol | torD |
ID | 4278905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2363578 |
End bp | 2364234 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638134780 |
Product | chaperone protein TorD |
Protein accession | YP_750677 |
Protein GI | 114563164 |
COG category | [R] General function prediction only |
COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.215454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGACA AGATATTGTA TAACACGCCA ATGAACCAGG GTCGTTCGAT GGTGTATAAG CTGCTCTCAT CACTGTTTGC AAAAGAGCTA GACCAACAGC TATTACAAGA GCTAACTGCA AGTCAGGCTC AGGCATTCTT TGCTCAATTG GCCAGTGACC CGTTATTGAG TCAAGACATT GAAACCATAA ACTCAGTGCT TAATTCAACC CTTAACAGCG TCAATACTGA TCATGCTTTA TTAGAGCTTG CTGCCGATTA TTGTGGCCTA TTTTTAGTAG GTACAAAGCA TAGCGCCAGT CCTTATGCCA GTTTATATCT TAACGATAAT GCAGTTGCCA AGGACGACAT ACTCTTATTT GGTGAACAGC ATCAGCAAAT GCAAACATAT CTAAAACAAA GCCAATTAAC GGTTCAAAGT GAATTTCCTG AACCGTCTGA CCATATTGCC GTTATTTTGG CTTATGTCGC TCACCAAGCG TGTGCTTGTG ACGATAACAC TCAGCTCAGC TTTATTAGGC AATATCTCCA CGCTTGGTTA CCCCGTTTTG TAGATAGACT TACCTCTGTG GATACTGGTC AGTTTTATTC AGCCATTGCT CACCTCACTC TGGCTTGGGT TGAAAGCGAT TGTGTAGGAC TAAAAGGTGC TCAGTAA
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Protein sequence | MNDKILYNTP MNQGRSMVYK LLSSLFAKEL DQQLLQELTA SQAQAFFAQL ASDPLLSQDI ETINSVLNST LNSVNTDHAL LELAADYCGL FLVGTKHSAS PYASLYLNDN AVAKDDILLF GEQHQQMQTY LKQSQLTVQS EFPEPSDHIA VILAYVAHQA CACDDNTQLS FIRQYLHAWL PRFVDRLTSV DTGQFYSAIA HLTLAWVESD CVGLKGAQ
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