| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1984 |
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| Symbol | |
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| ID | 4278896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2350740 |
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| End bp | 2351702 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134771 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_750668 |
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| Protein GI | 114563155 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.450438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAC ATGCCGTTGT CAGCCAAATA CTGCCATTTT CCTGTGTCGA CGGGCCTGGC
AGTCGTTTGG TGATATTTTT GCAAGGCTGC AACTATCAAT GTAAAAATTG TCATAATCCT
CACACCATCA GTTTGTGTGA TGCTTGTGGT GACTGCATTG ATAGCTGCCC TGAACAGGCG
TTGAGTCTTA TTCATTCACA AGCAATGCCG TTGCCCCAAA TGCGGTCACA AGAAATGTCG
TTACATGGAG ATCCAATACC AGTTAATCAT TCACCATGTA GTTCGCCAAG TAAGCCCCAT
ATTGTCTGGG ACAGCACAAA ATGCAGCCAA TGCGATACTT GCCTTGCGGT ATGCCCTAGA
CAATCGACGC CTAAAACGTC TCATTACACC GTTGAGCAAA TGCTAGAGGT TATCTACGGA
CAACGTCATT TTATCAATGG AATTACACTC AGTGGCGGCG AAGCGAGCTT ACAATTGCCT
TTTATTATTG AGCTTTTTAG TGCGATAAAG TCCTCAGAAC ATTTATCGCA TCTAAGTTGC
ATGCTCGACA CCAATGGCAG CTTGAGCTCA ACAGGTTGGC ATAAGCTACT GCCATTTTTA
GATGGCGCAA TGGTTGATTT AAAAGCATGG CAACAAGATA CCCATCATTA CATCACAGGG
CGTGATAACC AGCCGGTATT TACGTCAATC GAGTTACTGA CTCAGCACAA TAAATTGTAT
GAAGTAAGAC TGTTACACAT TCCCGGCATC ACGGATTATG AGAATGATGT TGACGCCCTG
GGCGGGTATT TATCCAACCT CCCCACAGAG ACTCGGGTGA AGTTAAATGC GTTTCATCAT
CATGGTGTTA AAGGCATAGG CTCTACATGG CCACAATGTA CTCAAGCGGA TATAGCGCGT
TTAGCAAATC AACTTACTCA GCGAGGAGTA ACCAATATCG TCTTACCGTC GCTGTACATC
TAA
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| Protein sequence | MSKHAVVSQI LPFSCVDGPG SRLVIFLQGC NYQCKNCHNP HTISLCDACG DCIDSCPEQA
LSLIHSQAMP LPQMRSQEMS LHGDPIPVNH SPCSSPSKPH IVWDSTKCSQ CDTCLAVCPR
QSTPKTSHYT VEQMLEVIYG QRHFINGITL SGGEASLQLP FIIELFSAIK SSEHLSHLSC
MLDTNGSLSS TGWHKLLPFL DGAMVDLKAW QQDTHHYITG RDNQPVFTSI ELLTQHNKLY
EVRLLHIPGI TDYENDVDAL GGYLSNLPTE TRVKLNAFHH HGVKGIGSTW PQCTQADIAR
LANQLTQRGV TNIVLPSLYI
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