| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1980 |
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| Symbol | |
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| ID | 4278892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2346796 |
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| End bp | 2347548 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134767 |
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| Product | hypothetical protein |
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| Protein accession | YP_750664 |
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| Protein GI | 114563151 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGATAC AAGCAATCAT TGGCGCATTA TTAATTGGTT TAGTGCTGAG TGTATTAGGG
TCTGGTGGCT CCATTCTTAC TGTTCCGGTG TTGCTTTACC TTATTGGAAT GCAACCCCAA
TTAGCTATCG CTTCGTCATT GTGCATTGTG GGTGCCATCA GTTTAATCAG CAGTATGGGC
TTTATTAAGC ATAAAAAGGT CTCTTGGCCT CATGTGCTTT TGTTTGGTTT ACCGGGCATG
GCAGGCACCT ATTTAGGCGC ATGGTTAAGC AGCTTTTTTA GTAGCGACAT ACAACTCACT
GTGTTTGTCA TTTTGATGCT CATTGGCGCG GTGATGATGT GGCGAAATCA ATCTAGCCGC
TACCAAGCTG GCAAACTGAA TATTGCTAAA ATCTTGTCGC AAGGATTAGC GGTTGGTGTT
GTCACCGGTT TTGTGGGTGT AGGTGGTGGT TTTTTAATTG TGCCTGCACT GGTGTTACTT
GGCGGCATTG AAATGTCGCT GGCGATTGGT ACCAGCTTAC TGATTATTTC AATGAACTCA
CTGGTCGGTT TTGCTAAATA TTACTCATTA CTTTCAAGTA AAGGGTTTGA GTTCGATTGG
TCGATTATTG CCATCATGAT TGCTGGCGGA CTTGTCGGCA GTATTGCCGG CCAATGGATA
AACCAATATT TACCCAAAGC GGTTTTACAA AAAATATTTG CCGTTTTTTT AGTGCTAATG
GCGCTATTCA TTGTAACTAA ATCCATTATT TGA
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| Protein sequence | MMIQAIIGAL LIGLVLSVLG SGGSILTVPV LLYLIGMQPQ LAIASSLCIV GAISLISSMG
FIKHKKVSWP HVLLFGLPGM AGTYLGAWLS SFFSSDIQLT VFVILMLIGA VMMWRNQSSR
YQAGKLNIAK ILSQGLAVGV VTGFVGVGGG FLIVPALVLL GGIEMSLAIG TSLLIISMNS
LVGFAKYYSL LSSKGFEFDW SIIAIMIAGG LVGSIAGQWI NQYLPKAVLQ KIFAVFLVLM
ALFIVTKSII
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