Gene Sfri_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1977 
Symbol 
ID4278889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp2344469 
End bp2345113 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content44% 
IMG OID638134764 
Producthypothetical protein 
Protein accessionYP_750661 
Protein GI114563148 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA CATCAAAGCA CAAAAAAACG GTTTTAAATG CACGTAACAT CAGTGCGTTA 
TTAGTGATTG CTGGCATGAG CAGCCTTTGC CATGCTGAAT CACTAACGGA ACAGCAGGTG 
CTTGAGCAAC AGGCTAATCA ACGTATTGCC GAATTTAGCC AAGCGTTAAA AGGTCAGTTA 
CAGGCCGCAA TTAAACAAGG TGGCTTAATC AATGCGGTGT CGGTGTGTAA ATCGGTTGCA 
CCTGCCATTG CCGCTGAAAA CTCGAAAGAG GGCTGGACAC TGACTCGAAC AAGTTTGCGT 
GTGCGTAATT CAGACAATAC GCCAGATAAA TGGGAGTTAT CGCAATTACA GCAATTTGAG 
CTGGTGAATG CCTCCGGACA ACAACCTGAA GATAAGCCAA TCGTGGCGAG TGAATTTATC 
GTCAATGAAG GTAAAACTCA GTTTCGTTAT ATGAAGGCCA TACCAGCGCA ACAATTATGT 
TTAGGTTGCC ATGGCAGTAA TATTGAACCG GAAGTGAGTG CATTGCTGAG CAAAACCTAT 
CCCGATGATA AAGCGATTAA CTTTTCCCTT GGTGATATTC GTGGCGCATT TTCACTGAAA 
AAAGATATCG AAACACCTGC ATCATCGGTT ACTGCTAAGC CATAG
 
Protein sequence
MKLTSKHKKT VLNARNISAL LVIAGMSSLC HAESLTEQQV LEQQANQRIA EFSQALKGQL 
QAAIKQGGLI NAVSVCKSVA PAIAAENSKE GWTLTRTSLR VRNSDNTPDK WELSQLQQFE 
LVNASGQQPE DKPIVASEFI VNEGKTQFRY MKAIPAQQLC LGCHGSNIEP EVSALLSKTY 
PDDKAINFSL GDIRGAFSLK KDIETPASSV TAKP