| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1972 |
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| Symbol | |
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| ID | 4278884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2340216 |
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| End bp | 2341136 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134759 |
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| Product | copper resistance D domain-containing protein |
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| Protein accession | YP_750656 |
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| Protein GI | 114563143 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1276] Putative copper export protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.910407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATATTAA CCGTATTTGA AATATCTGTG TTGATATCTA AATGGGTTAT CTATCTGAGT
GTTGCCGCCG TTATTGGCGG CACATTGATG CAATATCTCA TTAAGGGTCA ACCGAACCTT
GGTATTAGCG TTACAAAATA TACCGGCCTA GGTGCCGTGT TGGGGTTGAT TGCCGTTAGT
ATCAATTATT TTACTCAAGT AGGGGCTTTT GCTGAAAACG GCTTGATGGG AATATTCGAT
GCGCAGATGC ATGCTTTTCT GTGGCCAACC CAGGTAGGGC AAACGGTGCT TTGGCGCTTA
ATCGGCTTTG GGTTAATGCT AGTGGCTAGT GGTTTACTGT TACATAAGAA CCGCTATATC
AAAAAGTTTT CAGCTGTATT AGCGATTATC AGCTGTCTGT TAATTGCTGT CACGTTTACT
TTTATTGGCC ACAGCACTGA ACTGGGATTG CTTGCTCAAG GCTTAATATT GATACACGTG
TTGATCATTG GCTGTTGGAT AGGCGCTTTT TATCCATTAT GGAAATTATG TAGCACCGAT
GACCACAGTA ATGACAACGT CTATGACAAC ATCGTCATAA AAAATGTCAT GGATACATTT
GGTCGTTTAG GCATAGTGAT TGTCATTCTA GTGTTGCTTT CAGGCATGGG AATGGTGTGG
ATGTTGTTTG ATAGTCCCAC TGAATTATTC TGTTCCAATT ATGGTATTGC GGTCACCATC
AAGCTCTGTT TGGTGGCTAT CATTTTGCTT ATAGCAGCAT GGCATAAATT GGTTTTAGTA
CCGAAATTAA CGATTGCGAA CACATCACTC GCAAAACAAA AACTACAAAA ATCGATTGGA
TTAGAAGCAT TAATAGCAGT ACTGATATTA GCGACAACAG CGGTACTTTC GAGCGTGCTA
GGTCCTATGA GCCTTGGATA A
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| Protein sequence | MILTVFEISV LISKWVIYLS VAAVIGGTLM QYLIKGQPNL GISVTKYTGL GAVLGLIAVS
INYFTQVGAF AENGLMGIFD AQMHAFLWPT QVGQTVLWRL IGFGLMLVAS GLLLHKNRYI
KKFSAVLAII SCLLIAVTFT FIGHSTELGL LAQGLILIHV LIIGCWIGAF YPLWKLCSTD
DHSNDNVYDN IVIKNVMDTF GRLGIVIVIL VLLSGMGMVW MLFDSPTELF CSNYGIAVTI
KLCLVAIILL IAAWHKLVLV PKLTIANTSL AKQKLQKSIG LEALIAVLIL ATTAVLSSVL
GPMSLG
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