Gene Sfri_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1966 
Symbol 
ID4278878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2335339 
End bp2335773 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content35% 
IMG OID638134753 
Producthypothetical protein 
Protein accessionYP_750650 
Protein GI114563137 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TCATTGCGAT CACACTATTA TCTTTAGCTA GCTCAGTATC TATGGCTGCC 
ACAATTTCAT TACCTGACTA TTTAATTTTT ACCGCGATCG ATGGTAAATC GGTATCAAAT
AGTGCCCAAA TGGAGGTGTC TCCTGGTCAA CATCTAATAG AATTACAGTT TTATGATGTG
TTTTCATCAG GAGCAGACGA TACGAATTTT ATTAAATCCG ATGCGTTATA TTGGAGCCTA
CATCTAACCA AAGATGAAGA TATTCAAGTG CGTAGCAAAG AGATTTTCTC TTCAACTAAT
GCAAAGAAAT TTATTGCATC ACCGATGATA ACCTTAGACC GTGACAGCGT AAAAGGTGAA
AACGTGAAAT TAGTTAATCA CGAAGAGTTA ATGGCTATTA TCATGAAACA ACACAGTAAA
ATGATGCAAC AATAG
 
Protein sequence
MKKFIAITLL SLASSVSMAA TISLPDYLIF TAIDGKSVSN SAQMEVSPGQ HLIELQFYDV 
FSSGADDTNF IKSDALYWSL HLTKDEDIQV RSKEIFSSTN AKKFIASPMI TLDRDSVKGE
NVKLVNHEEL MAIIMKQHSK MMQQ