| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1960 |
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| Symbol | |
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| ID | 4278872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2329859 |
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| End bp | 2330842 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134747 |
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| Product | hypothetical protein |
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| Protein accession | YP_750644 |
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| Protein GI | 114563131 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0139154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAA GCCAACGACT TCCGCTCGCG ATTGGTGCCT TTATATTTGG CGCAATTATC
TTAGTGTTTA TTGCATTACT GTTCTTTTCC GGTGGGCGTA TATTTGCAGA GAAAGCCCCT
GTAGTGATGT TTTTTAACAG TTCTGTGCAA GGGTTACAGG TAGGCGCACC GGTAAAATTA
AAAGGGGTCA TAATAGGTGA AATAAGCGAT ATCAGTATCG ATTTCCCCAA CGACAGTAGC
CAGGGTGTCA CGGCTGCGGT TCATGCCGAC TTATTGTTGA AACGTATCAA TATAAAAGGG
ATCCAAGTAG GTGAAGAGTT TTTTTCTCAC GCCATCGATA ACGGCTTACG CGCCCAGCTG
AATTATCTGA GTTTACTCAC CGGACTGCTA TATGTTGAGC TGGATTTCTT TCCCAACACG
TCACCGGTAT TTCACGGAGA AAAAGATCAA TTATTAGAAT TGCCGACCAT CGCGACTGAT
TTCGAATCAC TGTCGAAAGA CTTGCAATCG TTAAACTTAA AAAGTTTAGT CAACAATGTC
GATAATTTAG CTCAGCAGCT CAGTGACATT GCCGCCAGCG GAAAAATACA GCAAGCACTG
GATAATTTTG ATAATGCAGC CAAAGCAGTT AAAAGCACCG CGATTAACTT AGACAACACT
CAAGCAGCAT TAGGTAAAAA TGGGCTTGAA GTGCTGCTAA AACTCGATAA TTTACTGGTG
CAATTAAATC ATGATGAACC CAAGTTCGTT GAGTCGCTAA ACCATAGTTT AACTGAATTA
CGCAGTACAC TATTAAGCAT TAATCAGCTT GCAAACCAAG CAGGCAACAC ACTCGACCAA
AACTCGCCAT TGTTGATAGA ACTCACCAAT ACATTGGAAG AAATCCGCCG CACAGCTCGA
TCGCTACGAA GCTTGAGCGA AACCTTAGAT GAACAACCTG AGGCCATCAT ACGTGGCAAA
AAAGCCCTAC CTTTAGGAGA ATAA
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| Protein sequence | MSKSQRLPLA IGAFIFGAII LVFIALLFFS GGRIFAEKAP VVMFFNSSVQ GLQVGAPVKL
KGVIIGEISD ISIDFPNDSS QGVTAAVHAD LLLKRINIKG IQVGEEFFSH AIDNGLRAQL
NYLSLLTGLL YVELDFFPNT SPVFHGEKDQ LLELPTIATD FESLSKDLQS LNLKSLVNNV
DNLAQQLSDI AASGKIQQAL DNFDNAAKAV KSTAINLDNT QAALGKNGLE VLLKLDNLLV
QLNHDEPKFV ESLNHSLTEL RSTLLSINQL ANQAGNTLDQ NSPLLIELTN TLEEIRRTAR
SLRSLSETLD EQPEAIIRGK KALPLGE
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