| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1951 |
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| Symbol | |
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| ID | 4278863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2315997 |
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| End bp | 2317100 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638134738 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_750635 |
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| Protein GI | 114563122 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2856] Predicted Zn peptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGCAG AGCGCCTAGA ACGAGCCCGC AAGGCTGCCG GGCTATCAAT GAATGCATTA
GCCAGCGAAG TTGGCCTATC CGCTAACGCC ATTAAAAAGT ACGAACATGG CACGACTATG
CCCTCTTCTT CAAATCTACT TAAGCTTGCA AAAGCGCTAG ATGTGCGCAG CGAGTACTTC
TTTCGGCCGA CCAAGGTGAA GTTAGAGGGT GTTGAGTACC GCAAGCGTGC GAGCACACCA
AAGAAAGTGT TAGACCGAAT CAATGGTGAC GTATTAGACC AAGCTGAACG TTGGCAAGAG
CTTTTAGAGT TGTATCCCGA CTCAGTGAAG CCTATCCCTG AGTTTGCTCT ACCTGATGAA
CTTCCAGAAC AAATCTTTAG CTTAGAACAA GCGGAAGACT TGGCTATTCA GATGCGCCAT
GCTTGGGAGC TAGGGCTAAA CCCTATTCAC GATATGATCG ATACCCTCGA AGCTAAGGGC
GTGATGATTA TTACCACGGA TGTGGAAACA GATAAGAAGT TTGACGGTTT AGCGGGCAAG
ATTGGTAGCA CTCCTGTAGT GGTGATCTCT ACCGCCCAAA GTGGTGACCG TCAGCGCTTC
ACCTTGGCCC ATGAACTTGG GCACTTAGTC GTGCATGGTC GTTTAGCTGA AGGGATTGAT
GAGGAGAAGG CTTGTAATGC CTTTGCTGGT GCATTTCTTT TACCTACCCA ATCACTTATT
GAATACTTGG GTGAAAAGCG CCGTCATATT GAACCACGTG AATTACTGAT GCTAAAGCAC
GAATACGGTA TTAGCATGCT AGCGGCACTG TTTCGAGCTG GCCAATGTGG AATAATTACG
CCTGCGACTC AGAAAAACCT ACTTATGCTG TTTAGCAAAA ATGGCTGGCG AACGGAGGAG
CCAGGAAAAG CATACCCTCA TGAATCGACT TATCTACATA AGCAGTTGGT ATATCGTGCT
TTAGGTGAAG AATACATAGG GGAGTCAAAA GCTGCAGAGT TACTTGGCAT GTCTGTTTCT
AGCTTTCGTA AAGAACGAAA GTTGGAGGTG TCGACTCAAG CACAGTTAGC TCAGGAGGCT
AGCCGTGCAG CAGCTGCTAA TTAG
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| Protein sequence | MFAERLERAR KAAGLSMNAL ASEVGLSANA IKKYEHGTTM PSSSNLLKLA KALDVRSEYF
FRPTKVKLEG VEYRKRASTP KKVLDRINGD VLDQAERWQE LLELYPDSVK PIPEFALPDE
LPEQIFSLEQ AEDLAIQMRH AWELGLNPIH DMIDTLEAKG VMIITTDVET DKKFDGLAGK
IGSTPVVVIS TAQSGDRQRF TLAHELGHLV VHGRLAEGID EEKACNAFAG AFLLPTQSLI
EYLGEKRRHI EPRELLMLKH EYGISMLAAL FRAGQCGIIT PATQKNLLML FSKNGWRTEE
PGKAYPHEST YLHKQLVYRA LGEEYIGESK AAELLGMSVS SFRKERKLEV STQAQLAQEA
SRAAAAN
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