Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1926 |
Symbol | |
ID | 4278838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2281014 |
End bp | 2281580 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638134710 |
Product | ecotin |
Protein accession | YP_750610 |
Protein GI | 114563097 |
COG category | [R] General function prediction only |
COG ID | [COG4574] Serine protease inhibitor ecotin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.527233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCTC TCAGTGTTAC TGATACCATA AAAATCGCGA TGACGGTTAC TGTCATCTTT GCTAGTGTTA TCTCATTTGG AACCAGAGCA ACCAGTCCCG TTGACAATAA TTATCTGAAC ACCCTAAAAA TCAATAGTAC GGTTATGGAT GTCAGTCAAT ATAAGCCGCA AGAAGCTAGT AAAATGTATC CTGCCCCCAC AGAGGGAATG GTCCAACATG TATTAACCCT ACCAGCACTA AATGATGAGC AAGATTACAT GCTTGAAGTG CAAATAGGCC AAAATAAAAT TGTCGATTGT AATAAGACTA AACTCATCGG TGAAATTGAC AAAATATCGC TAGCTGGTTG GGGATATGTC TATTACCAAG TAGATAAGGT GATGCAAGGT CCGACAACCA AAATGATGTG CACTAACGCC AAATCAGCTG AGTTTATTGT GCTTAATGAA GCCATGACGT TACGCTATGA CAGCCGTCAA CCAAAAGTGT TCTATTTGCC AGAAGGCACC GAATTACGCT ATAGAGTGTG GAAAACAGTG AGCGAATTTG AGTTTAGTGG CCAGTAG
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Protein sequence | MKPLSVTDTI KIAMTVTVIF ASVISFGTRA TSPVDNNYLN TLKINSTVMD VSQYKPQEAS KMYPAPTEGM VQHVLTLPAL NDEQDYMLEV QIGQNKIVDC NKTKLIGEID KISLAGWGYV YYQVDKVMQG PTTKMMCTNA KSAEFIVLNE AMTLRYDSRQ PKVFYLPEGT ELRYRVWKTV SEFEFSGQ
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