Gene Sfri_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1926 
Symbol 
ID4278838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2281014 
End bp2281580 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content41% 
IMG OID638134710 
Productecotin 
Protein accessionYP_750610 
Protein GI114563097 
COG category[R] General function prediction only 
COG ID[COG4574] Serine protease inhibitor ecotin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.527233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTC TCAGTGTTAC TGATACCATA AAAATCGCGA TGACGGTTAC TGTCATCTTT 
GCTAGTGTTA TCTCATTTGG AACCAGAGCA ACCAGTCCCG TTGACAATAA TTATCTGAAC
ACCCTAAAAA TCAATAGTAC GGTTATGGAT GTCAGTCAAT ATAAGCCGCA AGAAGCTAGT
AAAATGTATC CTGCCCCCAC AGAGGGAATG GTCCAACATG TATTAACCCT ACCAGCACTA
AATGATGAGC AAGATTACAT GCTTGAAGTG CAAATAGGCC AAAATAAAAT TGTCGATTGT
AATAAGACTA AACTCATCGG TGAAATTGAC AAAATATCGC TAGCTGGTTG GGGATATGTC
TATTACCAAG TAGATAAGGT GATGCAAGGT CCGACAACCA AAATGATGTG CACTAACGCC
AAATCAGCTG AGTTTATTGT GCTTAATGAA GCCATGACGT TACGCTATGA CAGCCGTCAA
CCAAAAGTGT TCTATTTGCC AGAAGGCACC GAATTACGCT ATAGAGTGTG GAAAACAGTG
AGCGAATTTG AGTTTAGTGG CCAGTAG
 
Protein sequence
MKPLSVTDTI KIAMTVTVIF ASVISFGTRA TSPVDNNYLN TLKINSTVMD VSQYKPQEAS 
KMYPAPTEGM VQHVLTLPAL NDEQDYMLEV QIGQNKIVDC NKTKLIGEID KISLAGWGYV
YYQVDKVMQG PTTKMMCTNA KSAEFIVLNE AMTLRYDSRQ PKVFYLPEGT ELRYRVWKTV
SEFEFSGQ