| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1855 |
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| Symbol | |
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| ID | 4278315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2192051 |
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| End bp | 2192950 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134638 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_750541 |
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| Protein GI | 114563028 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.464203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAC ATTTAGCCTG CCAACTTGAA TTGATCCATT TGTTTGTCCA TGTCGTTAAT
GCCGGTGGGT TTTCACCTGC AGCACAAGAG TTAAAGTTGC CCATTGCCAC TGTTAGCCGC
AAGATCAGTA AATTAGAACA AAGCCTCAAT ACTCAATTGA TAATGCGCAG TACCCGTAAA
CTTCGATTAA CTGAAGAAGG TGGTGCGTTA TTTGACCGTT ATTATAATGT GGTGGCGCAA
TTTGATCGTA TTTGTGGTCA AACTATTAAT GAGCCGCAAA GCACCCTACG AATATCGACA
CCCGTTTCGA TAACCTCGAT GATATTAATT GAGGCCATCA ATGACTTTTC CAAACAACAT
CCGCACATTC AACTGCACAT CACCCAAAAT AACAGCACCA TTGATTTGAT AGATGAAGGA
GTCGACGTCG CCATTGTCGG TGGCGCGCAA CCGGACTCAT CTTGGGTATC AACATCGTTG
GGAGTATTAA ATTACGGCCT GTATGCATCA CCTGAGTATG CCAAGCAACT CATTGAGCTT
CGCCACCCAA AGCAGCTGGT TGATTATCAG TTAATTAAAG TGTGGCCGCT GTTTAACTGG
ACCTTAAAAC ATCACAGTGG TGAACAATAT TATTACGATG GACCCGCTAA ATTAACCCTA
GGGGATTTAC ACGGCGCAAT ACGGGCAACT GTCGGTGATG GCGGGATTTT ATATGGGCCA
GAATTATTTG TTAAACCACA ACTATTGAAT GAAGAGCTAG TGCCTGTGCT AGCGGATTGG
GCTGGTGAGC ATCGACGTAT CAGTATTTTG TATCATCAAC GTCGTCAACA ACCCTTAAAA
GTAAAATTGT TTATTGAGTT TATTCAGCAA CGTGCTGCCA CTATCTTCGA CTTGTTCTAA
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| Protein sequence | MSQHLACQLE LIHLFVHVVN AGGFSPAAQE LKLPIATVSR KISKLEQSLN TQLIMRSTRK
LRLTEEGGAL FDRYYNVVAQ FDRICGQTIN EPQSTLRIST PVSITSMILI EAINDFSKQH
PHIQLHITQN NSTIDLIDEG VDVAIVGGAQ PDSSWVSTSL GVLNYGLYAS PEYAKQLIEL
RHPKQLVDYQ LIKVWPLFNW TLKHHSGEQY YYDGPAKLTL GDLHGAIRAT VGDGGILYGP
ELFVKPQLLN EELVPVLADW AGEHRRISIL YHQRRQQPLK VKLFIEFIQQ RAATIFDLF
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