| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1847 |
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| Symbol | |
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| ID | 4278113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2179865 |
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| End bp | 2182477 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638134630 |
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| Product | hypothetical protein |
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| Protein accession | YP_750533 |
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| Protein GI | 114563020 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.277811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAGA ATCTGAAGCC AGAAACGATT ATTCCACAAG AGCTATATGT ATCAAGAAAT
GCGGATAAAC AAATTAGAGA GTTAATAGGT AACATGGGCC GGCCTGGATA TATTTTGGTC
TCTCGACAAA TGGGGAAAAC TAACTTATTA ATAAATGCTA AGAGAAATTT GGAGTCTGAC
TCTGATATTA TTACTTATAT TGATTTGTCG AATAAACATG AAACTGCAAG AGATTGTTTT
AGAAATATTG TCGATACAAT TGTTGAAACA AATCCTAATT TATTGGGAAG AGCAGAGTTA
GATATTGCTG AAAGACGCGA GAACGTGAAA TCATCTGAAC ACAAAGAACA TAGCTATGAA
CTTAGGCGTA TATTGAAAGA TGTAAAAGGT AAGTTGGTTA TAAGTTTAGA TGAAATTGAC
TCTTTAACTC AAGCTGATTA TTCTGATAAG ATTTTTGCTC AAATAAGAAG TGTATACTTT
GATAGAGTTA ATTTTAATGA GTTCAATCGA TTGACATATA TTTTGTCAGG AGTTGCTGAA
CCTAGTGATA TAATAAAAGA TAGCTCTATA TCTCCATTTA ACATAGGTCA GAAGATATTT
TTAGGTGATT TTTCTGCGGC TGAATATAAC GAGTTGCTAG TTAAGTCTGA TATGCATTTA
GATGTTGAAG TTAAAGATAG AGTTTTTTAT TGGACGAATG GTAACCCTAG GTTGACATGG
GAAATATGCT CTGAGATAGA GGATTTAGTC AATCAAGGTG TTGTATTAAC AGCAGTAAAT
GTTGATAATA TTGTTGATGT TATGTACTTG AAAAACTTTG ACCGTCCGCC TGTAGATCAT
ATTAGAACTC TGATATCGAA AGATGTAAAG CTTAGGGATG GTGTTATTGC TATTAAATAT
GGCAAAGAAG AAAGCTTATC TGACGATGTT AAATCAAAGC TATACCTAGC AGGAGTACTT
GATTCTAATT ACGAAGAAGG GACTATTCGG ATAAAAAATA GAATTATTGA TATGTCTTTA
GAAGATGAAT GGCTTGCAAA TTTGGGTAAG ACTGAGTCGT TATCTATGGG AAATGCCGAT
AGTTCATATT CTAACAAGGA TTATCCGATT GCAATAAGGC AATATGAAGA GCTTTTGAGT
CGAAAAGATA ATTTAAGTTT TATTGAAGAA AACCAAATGT ACTACAAGCT AGCCGCGTGC
TATCTTAAAG CTGAAAAATA TTATAAAGTT ATTGAATATA GCGAACTTTG CAAATTTAGT
CTAAGTGAAA ACAAATCTAT TTGTTTAGAG TTGTTATGGA TGAAAGGAAG CTCATATGAA
AAGACCAATA ATAATGAGTT GGCATTAAAA TGTTATAATG AAATCTTGGG TTTAGATTTT
TCAACAAAAA GTGATATTTA TTTTAGAGCA AAATTAGATG CGATACTCCT TGAGTTAGTT
GATTTTGACA AAGTTTCAGA AGAATCTGTA AATAATATTT TTGGAAACTT TGTTTCTGAA
CTTCTAGAAG AGAGAGAGTC TGAAGAAAGT TCACTAAAGC CAATTGAAAT ATCATATTGG
TTGTCTCTTT CTTACTATAC TGAAGGAAGG TTTAGATTAG ATCTTAAGAT GTTTGAAAAT
GCAAGGTTTT GTTTTGAAAA CTGTCTTAAA CATGCTGATG ATGATGCTAA GTTTTTTCCG
GTTTTTGAGT TAATGAAACT TATAAAGATA CTCAATCTTG AACTAGATGT GTCTAATTCA
TATTTCGATA TCATTGTCGA TTTAGCTAGT AATAAAGAAA GAGTTGTATC ATTGGATTCA
AATGACTTTA CAATTACAGG GAAGTTTATA AAAGACTTAA TAGTATACTC GGCAAAAGTT
TTTGATGATG AAAAAACTCA ACTCCTCGTT GAAATATTCA GTCGCAATAT AAAAGTTAGT
GGTGGTAATT TTTACTCTCT TGTTATTGAG TCTGCTAGCG AGTTTATTAA GTTAAGTGAT
AATAAAAATA GTCTATTGTT GTTGAATTGT GTGTTTTCTG TTAATCGAAA GATCGTAGAT
CCTGAGGAGT ATTTTTTCGC TTCTAAGTTT ATTTCATTTT TTGATCAAAA TAGTGATAGC
GCTAAGAGTG TGTATTTTCA AGGATTTCAA AATTATGTGG AAATATCAGA TAATATAGAT
ATAACAATAT TTGAACGTGA GATTATTCGT CTTAGAGGTA TTAGTGATTT TAAAAGAGGG
GACGCATTGT GTGATATCGT TTTAAATTCT GATGGGAGTT TGAAAGGCGA TATTAGTGCG
AGAATGATAC CTATCCTATT TTTGAAAATG TTAATTCATG ATTCTGCTGA AAAACGATTA
CAATTTGCAT ATAAAATTAA TAGTAAACTA GATGAGGTGG ATTCTTCAGA GTATGAGAGT
GCTAGGCTTA ATAGAAAGAT AGTTAATCAT TTTAAGTTGA ATGCAAATAG AATTATTTTT
GAAAACACTC CAATTGAACA AGTTAAGTAT ACAAGCAAAA GATATAAGAG AAATGATAAG
GTTAGGGTTA AGTTCTCTGA TGGAAAAGTG GAAATAAAAA AGTTTAAACA AGTTCAAGCT
CAGTTGGAGA GTGGTGAGTG TGAAATAGTT TGA
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| Protein sequence | MRKNLKPETI IPQELYVSRN ADKQIRELIG NMGRPGYILV SRQMGKTNLL INAKRNLESD
SDIITYIDLS NKHETARDCF RNIVDTIVET NPNLLGRAEL DIAERRENVK SSEHKEHSYE
LRRILKDVKG KLVISLDEID SLTQADYSDK IFAQIRSVYF DRVNFNEFNR LTYILSGVAE
PSDIIKDSSI SPFNIGQKIF LGDFSAAEYN ELLVKSDMHL DVEVKDRVFY WTNGNPRLTW
EICSEIEDLV NQGVVLTAVN VDNIVDVMYL KNFDRPPVDH IRTLISKDVK LRDGVIAIKY
GKEESLSDDV KSKLYLAGVL DSNYEEGTIR IKNRIIDMSL EDEWLANLGK TESLSMGNAD
SSYSNKDYPI AIRQYEELLS RKDNLSFIEE NQMYYKLAAC YLKAEKYYKV IEYSELCKFS
LSENKSICLE LLWMKGSSYE KTNNNELALK CYNEILGLDF STKSDIYFRA KLDAILLELV
DFDKVSEESV NNIFGNFVSE LLEERESEES SLKPIEISYW LSLSYYTEGR FRLDLKMFEN
ARFCFENCLK HADDDAKFFP VFELMKLIKI LNLELDVSNS YFDIIVDLAS NKERVVSLDS
NDFTITGKFI KDLIVYSAKV FDDEKTQLLV EIFSRNIKVS GGNFYSLVIE SASEFIKLSD
NKNSLLLLNC VFSVNRKIVD PEEYFFASKF ISFFDQNSDS AKSVYFQGFQ NYVEISDNID
ITIFEREIIR LRGISDFKRG DALCDIVLNS DGSLKGDISA RMIPILFLKM LIHDSAEKRL
QFAYKINSKL DEVDSSEYES ARLNRKIVNH FKLNANRIIF ENTPIEQVKY TSKRYKRNDK
VRVKFSDGKV EIKKFKQVQA QLESGECEIV
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