Gene Sfri_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1841 
Symbol 
ID4278108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp2173025 
End bp2173612 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content40% 
IMG OID638134625 
Producttranscriptional regulator, TetR family protein 
Protein accessionYP_750528 
Protein GI114563015 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATA TTTCTAAATT TGATCGCGAA GACGTACTTG AAAGAGCAAA GAATCTGTTT 
TGGCAGAAGG GCTTTTTAGC CACATCCACG CGAGAAATTC AAACGGCTAT GGACATGCGA 
CCAGGCAGTA TTTATGCCGC TTTTGGTAGT AAAGCTGATT TATATCAAGC GTCACTTATG 
CGTTATGCCC AAGCTGGCGA ACAGAATTTA AATAACATGT TAGAACAGCA CGATCGTGCG 
TGGGTTGGAT TAACCCATTA TCTACGTGGA CTGATTAGAC CATGCTGTGA AGGTTCACCT 
AGCGAATTGT GCATGTTGGT AAGAACGTTA TCTGAATTAG ATGAATCTCA TCTTGATACA 
TTAAACGTTG CCCGTGAACT GCTCAGCAAA TTTGAACAAC GATTTGCCAG TATTATTGAC 
CAAGCTAAAC TTGAAGGCGA CTTACCTGCC CATTTAGACA GTCAACTTAC GGCTAAAAAA 
ATTCAAATCA ATATTATTGG TTTACGCTCT TATTTAAAAG CTACCGATGA CGTTGATATG 
GTGAGACAAC AGCAAGAAGA GTTTTTTACG CAACTCGCCA GCGTTTAA
 
Protein sequence
MANISKFDRE DVLERAKNLF WQKGFLATST REIQTAMDMR PGSIYAAFGS KADLYQASLM 
RYAQAGEQNL NNMLEQHDRA WVGLTHYLRG LIRPCCEGSP SELCMLVRTL SELDESHLDT 
LNVARELLSK FEQRFASIID QAKLEGDLPA HLDSQLTAKK IQINIIGLRS YLKATDDVDM 
VRQQQEEFFT QLASV