Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1839 |
Symbol | |
ID | 4278106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2171480 |
End bp | 2171938 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638134623 |
Product | hypothetical protein |
Protein accession | YP_750526 |
Protein GI | 114563013 |
COG category | [S] Function unknown |
COG ID | [COG3305] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACATT CTGATGGCGG CGTTCGTGCT GTCGCGGTGC TTGAAGCAAC AAAAGGCTTA CTGGCATTAC TGGTTGCCAT TGGCTTGCAT GTCTACACGG GCCAAAATCT GTCTGCGTTA GCGCTTGAGT TGGTGAGGCA TTTGCACCTA AATCCAGCGA GTCATTACCC TGGTATTTTT ATTTCTGCGG TGGGTTCAGT ATCGCAATCT AGTCTGACGT TAATGGCGTT TGGTGCGGCT GTATATACAT CGGTGCGCTT TATTGAAGCC TATGGTTTAT GGCATAACAT GCGCTGGACC CAATGGTTTG CACTGCTTAG CGGCGCGATA TATTTACCTT TTGAGCTTTA TGAAATGATT CGCCATTTTA GTATGCTCAG TGTAATTGTG CTGCTGATTA ACCTTGTGGT GGTCATGTAT ATGTATTTTG TGTTGTTTCC TCGTCGTGCA GTAATATGA
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Protein sequence | MKHSDGGVRA VAVLEATKGL LALLVAIGLH VYTGQNLSAL ALELVRHLHL NPASHYPGIF ISAVGSVSQS SLTLMAFGAA VYTSVRFIEA YGLWHNMRWT QWFALLSGAI YLPFELYEMI RHFSMLSVIV LLINLVVVMY MYFVLFPRRA VI
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