| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1789 |
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| Symbol | |
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| ID | 4277428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2106279 |
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| End bp | 2107544 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134573 |
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| Product | glucose/galactose transporter |
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| Protein accession | YP_750477 |
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| Protein GI | 114562964 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0540025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCAT CAATGCAAAG TACTCAACAA ACAACAGTGA CAGGTGACAG CGGTAGTTAT
CGCTTTGCTC TAGTGTCATT GACTTCACTG TTTTTCATGT GGGGATTTAT TACCTGTTTA
AATGATATTC TCATCCCACA TTTAAAAGCG GTGTTCTCAC TCAATTACAC CGAAGCAATG
TTGATCCAGT TTTGTTTCTT TGGGGCGTAC TTTTTAGTCT CATTACCAGC AGGTAAGTTA
GTCAAAAAAT TAGGTTATCA AAAAGGTATC GTCACTGGGC TCGTCATTGC TTGTATCGGG
TGTTTGTTAT TTTACCCTGC TGCAGCGTTT GCAACTTATG GATTATTCCT AGGTGCACTG
TTTGTATTGG CGTCTGGGAT CACCATTCTA CAAGTGGCGG CAAACCCTTA TGTCAATGCG
TTAGGCTCAG TTGAAACCGC ATCAAGTCGT TTAAACCTAA CCCAAGCATT TAACGCATTA
GGGACGACTG TAGCTCCTTT CTTTGGTGCT GTATTAATAT TGTCTGTTGC ATCTGGTGCG
GTAGAAGGCT TAAGCCAAGC GCAATCAGAA GCTGAAGTGG TAAAGCTTCC ATACCTTATT
CTGGCTGCAA TGTTAGGCTT GCTCGCGTTA ATTTTTTCCA AACTCAATTT ACCTACCATT
GCTGAACACA GTGATGATTC TGCTACTGGC GTGATAACGC ATAATGGTAA AACCAGTGCC
TTACAAAGCA TGCATTTAGT GTTGGGTGCT GTCGGTATTT TTGTCTATGT TGGCGCTGAA
GTGTCTATTG GTAGCTTTTT AGTTAACTTT TTAGGCGAAG AACAAGTTGC CGGTTTACAA
GAAGCAGAAG CCGCTAAATA TATCACCTAC TATTGGGGCG GGGCGATGAT AGGCCGTTTT
GTCGGTTCTG TGATTATGCA AAAAATCCCA GCAGGTACCA TGTTAGCGTT TAACGCTTTT
GTTGCCGCAG CACTGGTGTT AGTGGCAATG AACAGTACTG GCGCTGTGGC CATGTGGTCA
ATTTTGGCAG TTGGATTGTT TAATTCGATT ATGTTCCCAA CTATCTTTAG CTTAGCATTG
CGAGATTTAG GTCCACACAC CTCACAAGGT AGCGGCATAT TATGTTTAGC CATTGTTGGC
GGCGCAATTG TACCGTTATT ACAGGGTGTG ATGGCCGATA ACATGGGCCT GCAAGTGGCG
TTTATTTTAC CAGTTGTGTG TTATGCGTTT ATTTTATTCT ATGGCGCTAA AGGCTCAAGA
ATGTAA
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| Protein sequence | MASSMQSTQQ TTVTGDSGSY RFALVSLTSL FFMWGFITCL NDILIPHLKA VFSLNYTEAM
LIQFCFFGAY FLVSLPAGKL VKKLGYQKGI VTGLVIACIG CLLFYPAAAF ATYGLFLGAL
FVLASGITIL QVAANPYVNA LGSVETASSR LNLTQAFNAL GTTVAPFFGA VLILSVASGA
VEGLSQAQSE AEVVKLPYLI LAAMLGLLAL IFSKLNLPTI AEHSDDSATG VITHNGKTSA
LQSMHLVLGA VGIFVYVGAE VSIGSFLVNF LGEEQVAGLQ EAEAAKYITY YWGGAMIGRF
VGSVIMQKIP AGTMLAFNAF VAAALVLVAM NSTGAVAMWS ILAVGLFNSI MFPTIFSLAL
RDLGPHTSQG SGILCLAIVG GAIVPLLQGV MADNMGLQVA FILPVVCYAF ILFYGAKGSR
M
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