| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1772 |
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| Symbol | |
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| ID | 4277551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2080049 |
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| End bp | 2081086 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134556 |
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| Product | transcriptional regulator, LacI family protein |
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| Protein accession | YP_750460 |
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| Protein GI | 114562947 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.297999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCTA AAGCGACTTC TATTGATATA GCTTACCGTG CAGGCGTGTC GCAATCGACT
GTGTCTCGTG CGTTAAGAAA CAGTCCGTTG GTAAATTTAG AAACGCGACA GCGTATCCAA
GCCATTGCAA AAGAACTCAA TTATAAAGTC GATAAAAATG CCAGTAACTT GCGCATGCAA
AACAGCCATA CGTTAGCATT GCTAATTTGT GAAGATCCAA CTAATGATGA GTCGATGATC
AACCCATTTT TCCTCTCTAT GTTGGGTTCG ATCACTCGAG CAACCGCCCG TCAAGGTTAT
GATTTATTGG TGTCATTTCA GCAGCTTTCA ACTGATTGGC ATGCAGATTA TGAAGACAGT
AATAAAGCCG ATGGTATTAT TTTATTAGGC TATGGCGATT ATATGGATTA TGCCCATAAG
CTTGATAAGC TTATCGAAAA AAATACTCAT TTTGTTATCT GGGGAGCTGA GCATAACAAT
AAAGCGGTGT TGTCTATTGG TTGCGATAAT CATCAAGGTG GTTTTGTGGC CACGGAACAT
TTGCTTGGGT TAGGGCATAA ACACATTGCT TTTTTAGGTG ACTCATCAAG TCGCAGCCCT
GAATTTCGCG ACAGATATTT AGGTCATGTT GATGCTTTAC AATCTACCGG TATCGAGGCC
GACACACAGT TACAGCATGA CGCTATTAAT ACCGAAGCCT CTGGCTATCA TGCCGCCAAC
GTATTATTAG ATAGCGGCGT GACATTTGAT GCTATTTTTA CTGCGAGTGA TCTAATTGCG
ATAGGGGCGA TTCGTGCATT GAAAAAGCGC GGTGTTTTAG TTCCGGAGCA AGTTGCTGTA
GTGGGATACG ATGATATTCC GGTGGCCAGT TTTGCCAATC CGGCGTTAAC AACCATAAAG
CAAGATACTC AGTTCGCAGG TGAAATACTT GTCGAAAGTG TGTTGAAGTT AATCCGTGGT
CAAGAAGTTA GCCAGCGATT AATCAAGACC CATTTAGTGG TACGTAGTTC ATGTGGTGCA
AATGTAGAAG ATAATTAA
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| Protein sequence | MASKATSIDI AYRAGVSQST VSRALRNSPL VNLETRQRIQ AIAKELNYKV DKNASNLRMQ
NSHTLALLIC EDPTNDESMI NPFFLSMLGS ITRATARQGY DLLVSFQQLS TDWHADYEDS
NKADGIILLG YGDYMDYAHK LDKLIEKNTH FVIWGAEHNN KAVLSIGCDN HQGGFVATEH
LLGLGHKHIA FLGDSSSRSP EFRDRYLGHV DALQSTGIEA DTQLQHDAIN TEASGYHAAN
VLLDSGVTFD AIFTASDLIA IGAIRALKKR GVLVPEQVAV VGYDDIPVAS FANPALTTIK
QDTQFAGEIL VESVLKLIRG QEVSQRLIKT HLVVRSSCGA NVEDN
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