| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1739 |
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| Symbol | |
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| ID | 4277518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2045517 |
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| End bp | 2046485 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638134523 |
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| Product | membrane-bound lytic murein transglycosylase |
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| Protein accession | YP_750427 |
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| Protein GI | 114562914 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTCAAA AAATCATTTC ATGCGCATTT TTTTACTTCT TTTGTTCTAA TATTGCCATG
GCGGAAGACA GCCGTGGCGA ATTTACTGAC TACTTGTTGG AACTACAGCA AAAGGCAATT
GCCACTGGCG TTAATCAACT CACAGCAGAA CGCTATATTG CTAATATTAA AATCTTCAAA
AAAGCCAGCC TTAATACCCA TTCAGACGAA TCACAAACAT TAGAAGACTT TATTCCCCAA
GTTGTACCTG AAATTACCGT GAGTACTGCC AGAGCAATGT TTCAGCAGCA CGAATCACAA
ATACAAAATT TAAGCCGAGC TTATCAGGTT CAACCACGTT TCCTGATGGC GCTATGGGGG
ATGAACTCTC GTTTTGGTGA ACGTACAGGA CGTTTTTCTG GGTTATCTGT TTTAGCCTCA
CTGGCTTATA AAGGCGATAA AGAAGCTTTT TACATTAATG AATTTATTGC AGCGCTTAAA
TTAATTGAAC AAAAAAGTAT TACCGAAGAT TTATTGCGGA GTTCTTCATC TGGGGCTATG
GGGCAGATGC AAATGATGCC TAGCCAGATA CTCCAATACG GTATAGATGC CGATAAAGAC
GGCATCATTA ATGTCTGGGA CAGTATGGAT GATGCCTTTG CATCTACGGC TAATATGTTA
CATCGACAAG GTTGGCAATA TGATTCTACA TGGGGAAGAC AGGTAAAAAC GACCTTGATG
TTAGATCCCA ACTTACTTGG TTTACAAACA CATCACACAT TTTCACATTG GCAAGCCTAT
GGTGTCAGGC GTTTTGATGG TACAGATTTA CCCCAACGTA ATGACATGGA AGTATCATTA
ATTGCGCCGG ATGGACCCAA AGGTCGCTTT TATTTAACCT ATAATAATTT TCGTTTATTA
CATCAATTTA ATAATTCTTT GTACGATACG TTGGCAATAA CCTACCTTTC TGAGAAAATT
AAACAGTAA
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| Protein sequence | MIQKIISCAF FYFFCSNIAM AEDSRGEFTD YLLELQQKAI ATGVNQLTAE RYIANIKIFK
KASLNTHSDE SQTLEDFIPQ VVPEITVSTA RAMFQQHESQ IQNLSRAYQV QPRFLMALWG
MNSRFGERTG RFSGLSVLAS LAYKGDKEAF YINEFIAALK LIEQKSITED LLRSSSSGAM
GQMQMMPSQI LQYGIDADKD GIINVWDSMD DAFASTANML HRQGWQYDST WGRQVKTTLM
LDPNLLGLQT HHTFSHWQAY GVRRFDGTDL PQRNDMEVSL IAPDGPKGRF YLTYNNFRLL
HQFNNSLYDT LAITYLSEKI KQ
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