| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1718 |
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| Symbol | |
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| ID | 4277497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2024893 |
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| End bp | 2025942 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134502 |
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| Product | histidinol-phosphate aminotransferase |
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| Protein accession | YP_750406 |
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| Protein GI | 114562893 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAA CCTTAGCTGC GCCTTTTGAT CCAAAAACGT TGGCCAGACC CGAATTATTG
ACGTTGACCC CCTACCAGAG TGCACGACGA ATTGGTGGTC GTGGAGATAT TTGGATTAAT
GCCAATGAAT CACCATTCAA TAATAGTGAG CTTGATAAAG TTAATCGTTA CCCTGAGTGC
CAGCCGCCAG CATTAATCAA TGCTTACAGC GATTATGCTG GCGTAAAAGC CAGTAACGTG
ATTGCTAGCC GTGGTGCTGA CGAAGCAATT GAATTGCTCA TTCGAACATT TTGTATTCCT
GGTGTAGACA GTATTGCTTG TTTTGGTCCG ACCTATGGTA TGTATTCAAT TAGTGCAGCC
ACGTTTAATG TGGCGGTTAC CGCGTTAAGT TTAACCGATG ACTATCAATT ACCTGATGCA
TGGTCAACTC AAATCGGTAG TGCCAAAATT GTATTTATTT GTAATCCAAA TAACCCAACA
GGTACAGTGA TAGCTAAAGA TAAAATTGAA CAGGCTATTC AAGCGGCGCC AAATGCAATT
GTGGTGGTAG ACGAAGCCTA CATTGAATTT TGCTCAGACT ACAGCGTGGC TGATTTACTT
GGTACATACC CTAACCTTGT CGTGTTACGT ACATTATCAA AAGCATTTGC GTTAGCGGGC
GCACGTTGTG GTTTTATGCT CGCAAATGAT GACATGATTG ATTTAGTCAT GCGAGTTATT
GCTCCTTATC CGGTGCCATT ACCAGTGTCA GACCTTGCAG TAAAAGCGTT AAGTCCTGCT
GGTATCGACA CCATGCGAAC TCAAGTGGCC AGTTTAATTG AACAAGGTAA ACGTTTAAGT
ACTGCATTAA CCGCTTATGG CGCTAACGTA TTACCTGCCA ACGGTAATTA CGTATTAGCT
AAATTTGACG ATGTAAATGC AGCAGCAAAA AGACTCAGTG ATTCCGGTGT GGTTGCCCGT
GCGTACAAAG ATCCACGCCT TGCTGATGCA ATTCGTTTTA GTTTTACCTC AGCCAAAGAA
ACCGATGTGA TTATTCAGTT ATTTCGTTAA
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| Protein sequence | MSQTLAAPFD PKTLARPELL TLTPYQSARR IGGRGDIWIN ANESPFNNSE LDKVNRYPEC
QPPALINAYS DYAGVKASNV IASRGADEAI ELLIRTFCIP GVDSIACFGP TYGMYSISAA
TFNVAVTALS LTDDYQLPDA WSTQIGSAKI VFICNPNNPT GTVIAKDKIE QAIQAAPNAI
VVVDEAYIEF CSDYSVADLL GTYPNLVVLR TLSKAFALAG ARCGFMLAND DMIDLVMRVI
APYPVPLPVS DLAVKALSPA GIDTMRTQVA SLIEQGKRLS TALTAYGANV LPANGNYVLA
KFDDVNAAAK RLSDSGVVAR AYKDPRLADA IRFSFTSAKE TDVIIQLFR
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