Gene Sfri_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1704 
Symbol 
ID4277729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp2009165 
End bp2009743 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content41% 
IMG OID638134488 
ProductYceI family protein 
Protein accessionYP_750392 
Protein GI114562879 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.356687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAA AATGGTTACC ATTATTAGCC GCGAGCTTGC TGAGTACATC AGTGATGGCA 
GGCGATTGGC AAGTCAATCA AGATCATTCT CGAGTGAGCT TCATTTCGAT TAAGAAGGCC 
GATGTTGCCG AAGTGCATCA TTTTAAACAA GTTGCAGGTG CTTTAACGGA TGCAGGTGCC 
TTTTCTCTAT CGATTGATTT AAGCAGTGTT GATACCGGAA TAGAAATTCG TGATCAACGG 
ATGCAGACGG TATTATTTGA AGTTGCACAA TTTCCAAAGT TAACTTTGGA TGCGGTAGTT 
AATCCGAAAT TGCTAGCTGG ATTAAAAGTC GGTGACACGT TAACGACTCA AGTTGAGGCG 
ACCATAAAAT TACATGGTCA GAAACAACAG AAAAGTTTTG AAGTGTTAGT GGCTAAATTG 
TCTGACAAGA AAATGGTGAT TTCAAGTTTA GCGCCAGTAA TTGTTCAAGC AAATGAATTT 
GATTTAGTGT CCGGTGTCGA AAAACTTAAA GAAATGGCGG GATTGCCGAG CATCAGCTTA 
GCAGTGCCAG TGTCATTTGT GCTAACCTTA GCGCAATAG
 
Protein sequence
MMKKWLPLLA ASLLSTSVMA GDWQVNQDHS RVSFISIKKA DVAEVHHFKQ VAGALTDAGA 
FSLSIDLSSV DTGIEIRDQR MQTVLFEVAQ FPKLTLDAVV NPKLLAGLKV GDTLTTQVEA 
TIKLHGQKQQ KSFEVLVAKL SDKKMVISSL APVIVQANEF DLVSGVEKLK EMAGLPSISL 
AVPVSFVLTL AQ