| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1662 |
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| Symbol | |
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| ID | 4277321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1968027 |
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| End bp | 1969070 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134447 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_750351 |
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| Protein GI | 114562838 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTTT ATAATAACTC ACATCCATAC TACTGTGGTA TCGATTTACA TGCACGTTTA
CTTTATGTCT GTATCATTGA TTCTAAAGGG GAAGTTGTAG CTCATAAAAA GATAGGTGCC
AGTAAAGATG ACTTATTACT CATTCTAGAA CCTTATATCG GCAATGTAAT TGTCGGGGTT
GAGTGCATGC ATTGCTGGTA TTGGGTGTCA GACTGGTGTG CTGAACTTGG GGTTGATTTT
ATCTTAGGTC ATGCGCTTTA TATGAAGGCG ATTCACGGTG GTAAAACCAA AAATGATAAA
GTCGATTCCT TTAAAATTGC CACACTACTG CGTGGTGGTA ACTTTCCAAT AGCTTATGAT
TATCCAAGTG AAATGCGCGC AGCTCGTGAT CTACTGCGCC GAAGAATGAA GATTGTCCGT
CACGGGGCCA TGCTCAAAGG TCATGTGGTT AACACCAACA GCCAATACAA TTTACCTGCC
ACTGAACTTA ACCTTAAAAA CATCTCTGCA AGAAAAAAAC TTCGCGAGCA ATATCAAGAC
CCTATCGTGC AGCGCAACAT TGATTTAGAC ATGGCACTAC TTGATTGTTA TGCAAAGGAA
CTCGCACAGG TTGAATTGTT CATCGAAAAA CAAGCCAAAA ACCATAACCC CGTCTATTTA
GAACTACTTA AAACAGTACC TGGCATTGGT AAGATTTTAT CGCTGACAAT CCTCTATGAA
ATCGGTGATA TCAGTCGATT TGAATCAGTA CAAAAGTTTG CGTCATACTC TCGATTGGTC
AAATGCAAAG CGGAGTCAGC CGGTAAAACC TACGGCACAA ATGGCAATAA AATCGGTAAT
GCTCATTTGA AATGGGCATT CTCCGAAGCA GCGGTGCTTT ACCTACGTGG TAATGACAAA
GCACGTAACT ACCTTAATCG ATTACAAAAA CGAATGAGTA AAGCAAAAGC GTTGTCTGCA
CTGGCACATA AGCTTGGCCG CTGCGTCTAT TTCATGCTGA AGAACAAAAC GGTGTTTGAT
GAACAACGAT TCTTAAAAGG ATAA
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| Protein sequence | MRFYNNSHPY YCGIDLHARL LYVCIIDSKG EVVAHKKIGA SKDDLLLILE PYIGNVIVGV
ECMHCWYWVS DWCAELGVDF ILGHALYMKA IHGGKTKNDK VDSFKIATLL RGGNFPIAYD
YPSEMRAARD LLRRRMKIVR HGAMLKGHVV NTNSQYNLPA TELNLKNISA RKKLREQYQD
PIVQRNIDLD MALLDCYAKE LAQVELFIEK QAKNHNPVYL ELLKTVPGIG KILSLTILYE
IGDISRFESV QKFASYSRLV KCKAESAGKT YGTNGNKIGN AHLKWAFSEA AVLYLRGNDK
ARNYLNRLQK RMSKAKALSA LAHKLGRCVY FMLKNKTVFD EQRFLKG
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