Gene Sfri_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1654 
Symbol 
ID4277313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1960705 
End bp1961370 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content48% 
IMG OID638134439 
Productreplication P family protein 
Protein accessionYP_750343 
Protein GI114562830 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00054623 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCTA TTCAAACATT GGTTAATACC GGTTCAATTG TTGGCGCTAT GCAGGGTAAT 
GGCTCAAATC GCCAGCTGTC TGAAATGGAT GTGGCGATTG TCGATAGTGT GTTTGCAAAG 
CTGCGCGTGT TGTTTCCGGT TGGTGCGCCT AAGGATGATG TTGAGTCGTT GCACAAAGCC 
GAGTGGGTTA AAACGCTTGC CGTTCAAGGT GTGAGCAGTC GTGATCAAGT GCAAATGGGA 
TTAACTCGGG CAAGACGTGA GCAGGGTGAT CGCCAGTTTT GGCCAACACC ACGCCAGTTT 
GCGTTGTGGT GTCAGCCAAC GGCTTATGAC TATGGTTTGC CTGATTTGGA TTCGGCATAT 
CGTGAGGCTA AGCGCCATTA TCACAATGTA GCAGGCCATA AGTGGAGCCA TGATGTTGTT 
GGCTTGGCAG TGCGCCAATG TGGTACCTGG TTGTTTGCTA CCGGCATTGA AAAAGACGTA 
TTAACCATGT TTACCCGCCA ATACGAGATT TTATGTCGTA AATACGGCAA TGGTGAGTTG 
GTTGATGTTG AGTTACCTAA AGCGTTACCG ACCCGTGCTA CCCGCAGGAT TGAACCTGCT 
GAGGGTAAAG CGTTGGTGGC AAAGTTTAGG CGTCAACTTG GTTTAAGGAG TGCTAACGAT 
GAGTAA
 
Protein sequence
MKSIQTLVNT GSIVGAMQGN GSNRQLSEMD VAIVDSVFAK LRVLFPVGAP KDDVESLHKA 
EWVKTLAVQG VSSRDQVQMG LTRARREQGD RQFWPTPRQF ALWCQPTAYD YGLPDLDSAY 
REAKRHYHNV AGHKWSHDVV GLAVRQCGTW LFATGIEKDV LTMFTRQYEI LCRKYGNGEL 
VDVELPKALP TRATRRIEPA EGKALVAKFR RQLGLRSAND E