| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1629 |
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| Symbol | |
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| ID | 4277288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1940043 |
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| End bp | 1941263 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134414 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_750318 |
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| Protein GI | 114562805 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTATCGC CATCAAAATC CGACTCATCT CCAGTCTCTG CGGGTATTCC CCACTTAGCT
ATGCTAATCC CTATGCTGGC CGCTATTGTT GCCATCACGC CTTTAGCTAT CGATATGTAC
CTACCGGCAA TGTCCATCTT GGCATTAGGT TTTGATACCG ACATCACCAC AGTGCAGCAG
TCACTCAGTA TTTATCTTGC TGGTTATGCG TTAGGTATGC TGATTTTTGG CCCCCTTGCC
GACAAAATTG GTCGTCGACC CCTAGTTATC TTTGGGTTGT TAGGTTTCAC CATTATCAGC
TTATTAATTG CACTCAGTAC CAGTATTGAA CAGTTTTTGA TATTGCGTTT TGCACAAGCT
CTCATTGGTG CCGCTGCCAC CGTTGTAGTA CCAGGTTACA TTAAAGAGAT CTATGGCGAC
AATACAGCTA AAGGTATGTC TTATGTCAGC CTTATTATGA TGTTAGCGCC ATTACTTGCC
CCAACGATGG GCAGTTTAAT TATGGAGCTC GGCGATTGGC ACCTTATCTT TTTAAGCCAA
AGTTGTTATG CCATCACATT ATTGGCATTA GTATTATTTA AGCTAAAAAT GCCCAGCGAT
AAAGACCTAG GCGGTCGTAG CCAAAAGACA TTTTTAGGCG GTTACTACAC AGTCTTTGCT
CGCAATGGTG TAAAACTGAA TTTATCCAGC GGAGTATTAA CGTCGTTTGC TTTCTTTTGT
TACTTAACCG CTTCGCCATT TATTTACATG GAAGTGTTTA ATTTAGATAA ATCGCTGTTT
GCGATTTTAT TTAGCACCAA TGTGGGGGCC TTGATGCTCG CCAACATTGT TAACTCTAGA
GTGGTTACCC GGTTCGGATC TAAACGGATG TTGCATGTGT CAACATTCTT CGGGATTATT
GCCGCAACGG GCTTGCTCGC GGTTAATTTA CTTGATTTAA GCTATCACTT TACCGTGTTA
ATGCTTATCC CTTTAATGGG TTCGCTCGGG GTAATGTCGG TCAATGCCGA CGCCATTGTA
TTAATGAAGT TCAAACAAGA AACCGGCACC GCAACGGCCG TTATCGGCAC GTTAAGGTTT
GGTTTTGGCG CAGTAGCAGG GCCATTGTTG GCGTATTTTT ATGATGGTAG CGCCGTGCCC
TTTTCTGCAC TGATGCTTGG TTCAATATTG CTAGTCGGTG TATGTCAGTT TTTTCAAAGC
ACTTTAACTA GAACTGAATA A
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| Protein sequence | MVSPSKSDSS PVSAGIPHLA MLIPMLAAIV AITPLAIDMY LPAMSILALG FDTDITTVQQ
SLSIYLAGYA LGMLIFGPLA DKIGRRPLVI FGLLGFTIIS LLIALSTSIE QFLILRFAQA
LIGAAATVVV PGYIKEIYGD NTAKGMSYVS LIMMLAPLLA PTMGSLIMEL GDWHLIFLSQ
SCYAITLLAL VLFKLKMPSD KDLGGRSQKT FLGGYYTVFA RNGVKLNLSS GVLTSFAFFC
YLTASPFIYM EVFNLDKSLF AILFSTNVGA LMLANIVNSR VVTRFGSKRM LHVSTFFGII
AATGLLAVNL LDLSYHFTVL MLIPLMGSLG VMSVNADAIV LMKFKQETGT ATAVIGTLRF
GFGAVAGPLL AYFYDGSAVP FSALMLGSIL LVGVCQFFQS TLTRTE
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