| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1616 |
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| Symbol | |
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| ID | 4277275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1923393 |
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| End bp | 1925102 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638134401 |
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| Product | amidase |
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| Protein accession | YP_750305 |
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| Protein GI | 114562792 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGAAG TCACTGAGGT TTCTATTGCC GAGCTGCGTG CAGCCCTTGA ATCCGGTCGC
ACCACAGCGG TTGAGTTAGT GAAGTCTTAT TTAGCTCGGG TTGAGGTTTA TGACGGCCCC
GCGACGCAGA CTAAGCTGAA TGCACTGGTG GTTCACAACC CCGATGCCAT CAAAGAAGCT
GAGGCTTCTG ATGCTCGCCG AGCTCGTGGT GAAAGACTGA GTCCACTCGA TGGTATTCCT
TACACTACGA AGGATAGCTA CTTAGTTAAA GGGCTCACTG CGGCTTCTGG TAGTCCAGCG
TTTAAGGACT TAATTGCTCA ATACGACGCA TTTGCCGTTG AACGTCTGCG CGAAGCGGGG
GCTATTTGCT TGGGCAAAAC CAACATGCCG CCTATGGCTA ATGGTGGTAT GCAGCGCGGT
CACTATGGCC GTGCCGAAAG CCCATATAAT GCTAATTATC TTACCGCTCC CTTTGCCTCT
GGTTCTTCCA ATGGCGCGGG TACAGGTACG GCGGCAAGCT ATTCTGCTTT CGGCCTAGCC
GAAGAAACAT GGTCGAGCGG TCGTGGGCCA GCATCGAACA ACGGCCTGTG TGCTTATACT
CCGTCACGTG GGGTGATTTC TGTGCGTGGT AACTGGCCGT TGACACCGAC TATGGATGTT
GTGGTGCCTT ACACTCGTAC GATGGCCGAT ATGCTCGAAG TACTTGACGT TATCGTGGCA
GACGACCCTA TTACTCGTGG TGATTTATGG CGTCTACAAC CTTGGGTTGA AATCCCAAAA
GCATCAACTG TGCGTCCAAC ATCTTATCTG GATCTTACTG CTCAAGCCGA CACGCTTAAA
GGCAAGCGTT TTGGCGTACC GCGCATGTAC ATTAATAAAG ATGAATTGGC TGGCACCAGC
GAAAACCCGG GCATCGGCGG CCCGACTGGT CAGCGCATCA ATACTCGTGC GTCAGTTATC
GACTTATGGG AAGCCGCACG CTCAGCGCTG GAATCTGCTG GAGCTGAAGT CATTGAAGTC
GATTTTCCGC TGGTTTCTAA CTGTGAAGGT GATCGCCCTG GTGCGCCGAC CGTGTTCAAT
CGCGGCATCG TCACGCCTGA GTTTCTCGAT GATGAGCTAT GGGCACTATC AGGCTGGGCT
TTAGATGAGT TCTTGCGTGC TAATAATGAT CCTAAACTGA ATAAACTGGC AGACGTCAAC
GGCCATTTGA TTTTCCCGCA TGATCTTGGC ACCTTGCCCA ATCGTGAGGG CGACCTCGCC
GCTGGCATGG ATGAATACGT CAACATGGCC AAAAGAGGCC TTAAGTCGTA TAACCAAATC
GACAGTATAC CGGATGGTCT GCGCGGCTTA GAGAAGACTC GCAAACTGGA TCTGGAAGAC
TGGATGGACG AGCTAAAACT TGATGCAGTG TTATTCCCAA CGGTGGCAGA CGTGGGGCCG
GCAGATGCAC AGGTTAATCC AGCTTCTGCC GACATTGCGT GGAGTAATGG TGTTTGGGTT
GCCAACGGTA ACCTTGCTAT TCGCCACTTA GGTGTACCGA CTGTGACTGT GCCAATGGGC
GTAATGGCCG ACATTGGCAT GCCGGTTGGT TTGACTTTCG CTGGCCGTGC TTATGATGAC
AACGACTTGC TTCGGTTTGC GAGTGCATTT GAGGCAACGG GCAGCAAGCG CGTTATCCCT
CCACGAACGC CAGTGCTAAG CAATAAGTAA
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| Protein sequence | MFEVTEVSIA ELRAALESGR TTAVELVKSY LARVEVYDGP ATQTKLNALV VHNPDAIKEA
EASDARRARG ERLSPLDGIP YTTKDSYLVK GLTAASGSPA FKDLIAQYDA FAVERLREAG
AICLGKTNMP PMANGGMQRG HYGRAESPYN ANYLTAPFAS GSSNGAGTGT AASYSAFGLA
EETWSSGRGP ASNNGLCAYT PSRGVISVRG NWPLTPTMDV VVPYTRTMAD MLEVLDVIVA
DDPITRGDLW RLQPWVEIPK ASTVRPTSYL DLTAQADTLK GKRFGVPRMY INKDELAGTS
ENPGIGGPTG QRINTRASVI DLWEAARSAL ESAGAEVIEV DFPLVSNCEG DRPGAPTVFN
RGIVTPEFLD DELWALSGWA LDEFLRANND PKLNKLADVN GHLIFPHDLG TLPNREGDLA
AGMDEYVNMA KRGLKSYNQI DSIPDGLRGL EKTRKLDLED WMDELKLDAV LFPTVADVGP
ADAQVNPASA DIAWSNGVWV ANGNLAIRHL GVPTVTVPMG VMADIGMPVG LTFAGRAYDD
NDLLRFASAF EATGSKRVIP PRTPVLSNK
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