Gene Sfri_1613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1613 
Symbol 
ID4277272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1919959 
End bp1920636 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content45% 
IMG OID638134398 
Productglutathione S-transferase domain-containing protein 
Protein accessionYP_750302 
Protein GI114562789 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACTT TGCACGGTTT TGCCGCGAGC AACTATTACA ACCTAGTGAA ACATGTACTG 
CTATATAAAC AACTGCCATT TACAGAAAAC CTTATTTACG GTGGTAGTGA AAAGCTATTG
GCAATCAGCC CCGCTGGCAA AGTACCTGTA ATCACAACGC AAGAAGGTCT TTACCTGTCA
GAGTCGAGTG TCATCTGTGA CTTTATCGAA GAAACCTCCC CTGCCATTCC GCTATATCCT
GACAATGCAG GAGAACGTGC TGTTGTACGT CAAATAATGA AAATGGCAGA GTTGTATTTT
GAACTGCCTA GCAGACGACT CATACCTTAT GTGTTTTCAG GCACTGAAAT ACCAGAGTCG
GTTAAAACTG AAGTCCGCCA GGTATTAACC CGTGGCGTTA CAGCCTTAAA TCGCTTGTGC
CAGTTTTCAC CTTGGATTGC CGGTGAAAAA TTCACCATGG CTGACATCTA CGTTTATTAC
GTCAACACCA TTGTTAGTGC GTTTGGCTCG AGCCAGCTTA ACTGGGATGT ACTGGCAGAC
ATACCAGGCA TGAAACAGTG GAACGATGCC ATGAGCCAAA CGGTTATTGC CCAACAGGTG
GAATCCGATC GCCTAGCAAA CATGCCCGAA TTTATGCAAA AAGTGAAAGC TCAAATCCAA
GCGGCGAACG CTGGATAA
 
Protein sequence
MMTLHGFAAS NYYNLVKHVL LYKQLPFTEN LIYGGSEKLL AISPAGKVPV ITTQEGLYLS 
ESSVICDFIE ETSPAIPLYP DNAGERAVVR QIMKMAELYF ELPSRRLIPY VFSGTEIPES
VKTEVRQVLT RGVTALNRLC QFSPWIAGEK FTMADIYVYY VNTIVSAFGS SQLNWDVLAD
IPGMKQWNDA MSQTVIAQQV ESDRLANMPE FMQKVKAQIQ AANAG