Gene Sfri_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1603 
Symbol 
ID4277995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1907675 
End bp1908076 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content44% 
IMG OID638134388 
Producthypothetical protein 
Protein accessionYP_750292 
Protein GI114562779 
COG category[S] Function unknown 
COG ID[COG3602] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000462235 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGGTG AAACAAATTT AACGGCACTA CTCGCATCGA TGTCACCGGT ATTGTTAGAT 
GACGAATACG TTTTTTGCTC AGTGCCGGGC GGCCAATATG GTGATTATCA AAGCTTATCG
CCAATTGCGA CCTTTCGCGA ATCTGAAGGG TTGACGTTAG TATTAACCAA AACGGCAGCT
ATAGAGGGCG GCTTGTCTTT TGAATCAGTA TTTAAAGGCA TTACCTTAAC GGTGCACTCT
AGTCTTGATG CCGTTGGTTT AACGGCCGCC GTAGCCAATA AGCTCACCGA AAAAGGCATA
AGCGCCAATG TTATTGCCGC TTATTATCAT GACCATATTT TTGTGCAAAC AGAAAAGGCG
GCTTTAGCCA TCGAAGCGCT AAATGAATTT AGTAAAGTGT AA
 
Protein sequence
MVGETNLTAL LASMSPVLLD DEYVFCSVPG GQYGDYQSLS PIATFRESEG LTLVLTKTAA 
IEGGLSFESV FKGITLTVHS SLDAVGLTAA VANKLTEKGI SANVIAAYYH DHIFVQTEKA
ALAIEALNEF SKV