Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1603 |
Symbol | |
ID | 4277995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1907675 |
End bp | 1908076 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134388 |
Product | hypothetical protein |
Protein accession | YP_750292 |
Protein GI | 114562779 |
COG category | [S] Function unknown |
COG ID | [COG3602] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000462235 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTAGGTG AAACAAATTT AACGGCACTA CTCGCATCGA TGTCACCGGT ATTGTTAGAT GACGAATACG TTTTTTGCTC AGTGCCGGGC GGCCAATATG GTGATTATCA AAGCTTATCG CCAATTGCGA CCTTTCGCGA ATCTGAAGGG TTGACGTTAG TATTAACCAA AACGGCAGCT ATAGAGGGCG GCTTGTCTTT TGAATCAGTA TTTAAAGGCA TTACCTTAAC GGTGCACTCT AGTCTTGATG CCGTTGGTTT AACGGCCGCC GTAGCCAATA AGCTCACCGA AAAAGGCATA AGCGCCAATG TTATTGCCGC TTATTATCAT GACCATATTT TTGTGCAAAC AGAAAAGGCG GCTTTAGCCA TCGAAGCGCT AAATGAATTT AGTAAAGTGT AA
|
Protein sequence | MVGETNLTAL LASMSPVLLD DEYVFCSVPG GQYGDYQSLS PIATFRESEG LTLVLTKTAA IEGGLSFESV FKGITLTVHS SLDAVGLTAA VANKLTEKGI SANVIAAYYH DHIFVQTEKA ALAIEALNEF SKV
|
| |