Gene Sfri_1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1598 
Symbol 
ID4277990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1903314 
End bp1903664 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content42% 
IMG OID638134383 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_750287 
Protein GI114562774 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.548689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAC ATCATAGTAT TAATTATTTA GAAATACCCG TGAAAGACCT CATCGCAACC 
AAAGCCTTTT TTACTCAGGT TTTCGGTTGG CAGTTTCAAG ACTATGGTCC TCAATACAGT
TGTTTTTTGC AGGTCGGAAT TGATGGTGGT TTTTATCAAG CAGACTCTCA ATTCACCTTA
GCAAATGGCA GCCCGTTAAT TGTGCTTTAC AGCCAAGATT TGGCCGCCAC AGAAGCTAAA
ATCATTCAGG CTGGTGGACT CATCACCAAA GCCGTATTCA GTTTTCCTGG CGGTAGGCGT
TTCCATTTTA GCGACGTCAA TGGTAACGAA TATGCCGTCT GGTCAGAATA A
 
Protein sequence
MSQHHSINYL EIPVKDLIAT KAFFTQVFGW QFQDYGPQYS CFLQVGIDGG FYQADSQFTL 
ANGSPLIVLY SQDLAATEAK IIQAGGLITK AVFSFPGGRR FHFSDVNGNE YAVWSE