Gene Sfri_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1587 
Symbol 
ID4277979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1892220 
End bp1892681 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content44% 
IMG OID638134372 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_750276 
Protein GI114562763 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTA TGATTGATGA TTTACAGGGC TCTGGCGTGA TTGAGTTACT GCAAGCACAT 
TTGGCTGATA TGTATGCAAC GTCGCCACCA GAGAGTGTTC ATGCATTAGA TATTGAAGCC 
TTAAAACACC CATCAATTAC TTTTTGGTGT GCCAAGCAAG CTGACATAGT ACTAGGGTGC 
GTAGCGATAA AACAACTAAC GCCAACCCAT GGCGAAATAA AATCTATGCG AACGGCTGCG 
ACGGCAAGAA ACCAAGGTGT AGCGTCGACA TTGTTGTTGC ACATATTGGA CGTCGCTAAG 
TCTCGTGGTT ATCAGCGGTT GAGCTTGGAG ACGGGGTCTA TGGACTTTTT TGCTTCAGCA 
AGGCGTTTAT ATGAACGACA TCAATTTGAT TACTGCGGCC CATTTTCGGA TTATGAGCTA 
GATCCTAATA GCTTGTTTAT GACGCGATTA ATTGAACGTT AA
 
Protein sequence
MDIMIDDLQG SGVIELLQAH LADMYATSPP ESVHALDIEA LKHPSITFWC AKQADIVLGC 
VAIKQLTPTH GEIKSMRTAA TARNQGVAST LLLHILDVAK SRGYQRLSLE TGSMDFFASA 
RRLYERHQFD YCGPFSDYEL DPNSLFMTRL IER