| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1539 |
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| Symbol | |
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| ID | 4277775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1832236 |
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| End bp | 1833099 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134319 |
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| Product | thioredoxin domain-containing protein |
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| Protein accession | YP_750228 |
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| Protein GI | 114562715 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0176064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTACC TCATTAATCT TACTAAAGAT AATATTCAAC AAGTTGTTGA TACCTCAATG
CAAAAAATGG TGGTATTAGC ATTTTGGGCG CAACAACAGC CCGAAAGTGT ACAAATGTTG
CAGACGCTGG AGCATCTTGC CAATAGCCAA GGTGGGCGAT TTATTCTCGC TAAAGTGGAT
TGCGAAACCG AGTTAGAAAT TGCTAACTAC TTCCAAATTC AGAATGTACC GACCACATTA
ATTTTAGATA AAGGCAGACC CATTGATGGT TTTGCTGGGG CGCAAAGCCA GGAACAGATT
AGTGATTTTC TCGACAAACA TTTACCACCG ATGTGGATAC AAGAGTTTGA TGACGTTAAG
CAATTATTAG CCCAAGGCGA GTTATCGTCA GAAGACTTAA CTCGCATTGC TGAACAGTTA
AAAACAATTT ATATCGATGC ACAACAAGCA CCTGAAGTCG CACTGGTGAT GACAGATGTA
GCATTACAGC AAGGTTTACT GGCGGAAGCA AAAGGGTTAC TTGCCCGTAT AGGTTTAGCG
GATCAAGACA GTTACTATCA TAATTTAGTG GCTAAATTAG CGTTAGCGGA AGATGCGGCT
GATACTCCAG AAATTCGTCA ACTGCAACAA AATCTCGCAG AGCAGCCAGA TAATGTAGAC
GCTGTTATCA TCTTGGCCAA AGCATTAAAT GCAGCTCAAC GTAATGAAGA AGCCCTTGAA
TTATTGTTTG TTATTTTACA AAAAGATATG AACGCTGCTG ATGGGAAAAT CAAACAAGTC
TTCATGGAAA TCTTAACCGC GATAGGTCAG GGCAATGCGT TAGCCAATCA ATATCGCCGT
AAATTGTATA CCTTGTTGTA TTAA
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| Protein sequence | MDYLINLTKD NIQQVVDTSM QKMVVLAFWA QQQPESVQML QTLEHLANSQ GGRFILAKVD
CETELEIANY FQIQNVPTTL ILDKGRPIDG FAGAQSQEQI SDFLDKHLPP MWIQEFDDVK
QLLAQGELSS EDLTRIAEQL KTIYIDAQQA PEVALVMTDV ALQQGLLAEA KGLLARIGLA
DQDSYYHNLV AKLALAEDAA DTPEIRQLQQ NLAEQPDNVD AVIILAKALN AAQRNEEALE
LLFVILQKDM NAADGKIKQV FMEILTAIGQ GNALANQYRR KLYTLLY
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