Gene Sfri_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1531 
Symbol 
ID4277486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1823942 
End bp1824535 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content41% 
IMG OID638134311 
ProductDoxX family protein 
Protein accessionYP_750220 
Protein GI114562707 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACAC TAAGTGGATT ATATCAGCAG TTTTTAAATG TGATTAAACA TACAGAAGGC 
TTAGCTGCCT TAATGTTAAG GCTTTATCTT GCGCCAGTAT TAATGCAGGC TGGTTACAAC 
AAATTGTCAC ATTTTGAAGA TACCGCAGCA TGGTTTGGCA ATCCCGACTG GGGACTCGGT 
TTACCTATGC CTGAAGTCAT GACAGCGTTA GCAGCAGGCA CTGAATTGTT CGGTGGTTTT 
TTACTGCTGA TAGGTTTAGC CACTCGACTC GTTGCGTTAC CGATGATGGT CACTATGTTA 
GTTGCTGTTT TTGCGGTGCA TTTACCTAGT GGTTGGTTGG CAATTGCTGA CCCAAGTTCG 
TGGTTAGCGA ATGAGCAAGT GTTAGCTTCA GCAGAAAAGC TATCTGCAGC GAAATCTATT 
TTACAAGAGC ATGGTAATTA TGAATGGTTA ACCAGTTCAG GTAATTTTGT TATTTTAAAT 
AATGGTATTG AATTTGCGAT GACGTATTTA ATCATGTTAC TGGCATTATT TGTAATTGGT 
GGCGGCCGTT ATACGAGTGT TGATTACTTT ATAGGGCGTC GGTTGTTAAA GTAA
 
Protein sequence
MQTLSGLYQQ FLNVIKHTEG LAALMLRLYL APVLMQAGYN KLSHFEDTAA WFGNPDWGLG 
LPMPEVMTAL AAGTELFGGF LLLIGLATRL VALPMMVTML VAVFAVHLPS GWLAIADPSS 
WLANEQVLAS AEKLSAAKSI LQEHGNYEWL TSSGNFVILN NGIEFAMTYL IMLLALFVIG 
GGRYTSVDYF IGRRLLK