Gene Sfri_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1518 
Symbol 
ID4277473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1812701 
End bp1813246 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content42% 
IMG OID638134298 
Producthypothetical protein 
Protein accessionYP_750207 
Protein GI114562694 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.5509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGTC AGGCAGTTTT GTTAAGTGAT GCTATTGCTG ATGATCGTAA AGATGTTGAC 
GTTAATGTTC CAGAGTTTAC TAAAGCTAAT ATTGCGCCCA CCACAGATGA AGTTATTCCA 
GAATCCTCAG CTTCAAAAGC TCAAGAGAAT TTATTGCATT CAACTGAACC TGTAGTGAGT 
GTCAGTGATG CAAAACCTAA GCGTGAAGCT GATTTAATTG ATGGGTTAAT CTTAAATAGA 
GCCATGACAA GATTTGGCCA CCGTTTTTAT AGAGAATTTG TTAGCGCTTA TCGTGATATC 
AATGGCATGA GCAACCACTC GGGGCTCACT GTTGTAGAGC AAGCCACAGC AAGAAGTGGT 
AGTAAAATTT TAGTGTTGCA TAATCGCAAG CCGGTTTTTG TGACGTTTTT ATCCCCAGCA 
TCGCGAAATA TTGATGCACA AGCGAACATG GCAGCAAAGC GGGTAAATGC TTCCTTGTTG 
CAATATCAAC AACAGGCAAA ATGGGCGGCA TTTTCAGACC CCGATCTTGC TCCTGATGAG 
TTTTAG
 
Protein sequence
MASQAVLLSD AIADDRKDVD VNVPEFTKAN IAPTTDEVIP ESSASKAQEN LLHSTEPVVS 
VSDAKPKREA DLIDGLILNR AMTRFGHRFY REFVSAYRDI NGMSNHSGLT VVEQATARSG 
SKILVLHNRK PVFVTFLSPA SRNIDAQANM AAKRVNASLL QYQQQAKWAA FSDPDLAPDE 
F