| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1506 |
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| Symbol | |
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| ID | 4277461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1797107 |
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| End bp | 1797991 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134286 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_750195 |
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| Protein GI | 114562682 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAG TAGAAGCAAT GATAAAAGGT CATCAATCTA TAAATGCTTT AGGGCATGCC
GCAAATGAAT TACACGCGGG TGATGTGGCT ATTGTTGGTG CGGGTTGTGG TCAATTAGAG
TTAATGACAC TTAAGGCCGC TAGAATAGTG GCACAAGCTG AAGCGTTGGT GTTTGACAGC
CTGGTGAGTC GTGACATTTT GACGTTAGTA ACCCCGAGTT GTCAGCGTCA CTTTGTGGGT
AAACGCTGTG GTCAGCCGAG TAAAAAGCAA GACGATATTA ATGAATTATT ACTGACATTG
GCGCAGCAAG GATTAAAAGT GGTGCGCTTA AAGGGCGGCG ATCCGCATAT TTTTGGTAGA
GGTTCAGAAG AAGCGCTTTA CCTTGCACAA AATGGTATCC GTTCGCAATT TATTCCAGGT
GTTACCGCAG CGTTAGGTTG TGCATCAAGT ACCGGCATTC CATTAACGTA TCGTGGTATG
GCCCGTAGTG TCACGCTGAT CACCGGCACC AAAATGACCG ATGCCGATAA TGCCAATGCT
CCAACTCAGT GGCAAGCATT GTTAGCGGCG CAATCTACGT TAGTGTTTTA TATGGGTAAA
GAACAAGCTG CAAGCATTTC AATTGGGTTA CTCGATACTC AATGTGGCGC TAATCTGCCG
GTAGCATTTG TTACCAATGG TGGAAGACCG AATCAAATTG TTACTTATGC CACAGTCGCT
TCTATGGCCG ATGCCGCGTT AACCATTAAA GACTCTGGGC CGACGTTAAT CATCATTGGT
GACGTGGTGT CTGTTGGTCA ACAGCTGAAT GCTTTGCTTG CCGATATTGA TGTAGCTGCA
ACACAACCCC CATTAGAATA TGGGTACGAG GCTTTATATG CCTAA
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| Protein sequence | MKTVEAMIKG HQSINALGHA ANELHAGDVA IVGAGCGQLE LMTLKAARIV AQAEALVFDS
LVSRDILTLV TPSCQRHFVG KRCGQPSKKQ DDINELLLTL AQQGLKVVRL KGGDPHIFGR
GSEEALYLAQ NGIRSQFIPG VTAALGCASS TGIPLTYRGM ARSVTLITGT KMTDADNANA
PTQWQALLAA QSTLVFYMGK EQAASISIGL LDTQCGANLP VAFVTNGGRP NQIVTYATVA
SMADAALTIK DSGPTLIIIG DVVSVGQQLN ALLADIDVAA TQPPLEYGYE ALYA
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