| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1461 |
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| Symbol | |
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| ID | 4278465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1745077 |
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| End bp | 1746039 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134236 |
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| Product | TolA family protein |
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| Protein accession | YP_750151 |
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| Protein GI | 114562638 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | [TIGR02794] TolA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00341972 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCTGGAA ATTCAGATTT AACCGTACCA GTTTCTATTT CTGCTGGTAT TCATATTGGA
TTTATCGTCA TTCTTGCTTT AGGCATTAGT TTTGATGATA AGCCCAAGCA AATGCAAACG
GCAGCAGCAA GTGCACCTGC CGTTCAAGCA ATTGTAATTG ATCAACAGAA AGTTAATGAC
AGAGTTGAGC AATTAAAGAA ACAAAAGCAA GATGTGGCCA AGCAAGAAAA AGCCCGTCAA
GCAGAACTAG AACGTAAAGC ATCAGAAGCT CGCCGTGAGC GTGAACGTGA ACAAGAAAAA
ATTAAAACTT TAGAGATCCA GCGTAAACAA AAAGAGCAGG AAACTCAAAA GGCTAATGAC
GCCGCTAAAG CAGCTCAGGC AAAGCAAGTG CTAGAAAAAG AGCGAGCAGA TAAAGCTGAA
GTAGTACGCA AGCAAAAAGA ACAAGAGCAA AAAGCTTCTG AGGACGCAGC TAAGAAAGCA
GCTGAAAAAC GTAAGCAAGA AGAGGCTGCT GCGAAAAAAG CTCAAGAAGA ACGTCAACGT
GCTGATGACG AACGTAAGCG TAAAGAAGAT GCTGAGCGTA AACGTAAAGC AGAAGCTGAT
ACTAAAGCGC GTCAAGAACG TGAAATGGCA GAGGCTATGG CTGCTGAACA AGATTCACTT
TCTAAAACAC GTAACAAGCA AGTGTTGTCA GAAGTTGATA AGTATAAAGC CATGATTATT
GCCACTATTC AACGAAATTT AGTTGTTGAT GAGTCAATGC GTGGGAAAAG CTGCAGGGTC
TTTATTCGTC TAGCGTCAGA TGGTTTTGTC ACAACAAGCC AAACGTTAGA TGGTGATCAG
GTAGTTTGTC GAGCAGCCAA AGCGTCGATA AATAAAGCGG GACGGTTACC AGTATCGCCT
GAACCGGCTG TTTATCAGCA ATTAAAAGAA ATTAATTTAA CCGTTTCACC GGAATTTAAT
TAA
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| Protein sequence | MAGNSDLTVP VSISAGIHIG FIVILALGIS FDDKPKQMQT AAASAPAVQA IVIDQQKVND
RVEQLKKQKQ DVAKQEKARQ AELERKASEA RREREREQEK IKTLEIQRKQ KEQETQKAND
AAKAAQAKQV LEKERADKAE VVRKQKEQEQ KASEDAAKKA AEKRKQEEAA AKKAQEERQR
ADDERKRKED AERKRKAEAD TKARQEREMA EAMAAEQDSL SKTRNKQVLS EVDKYKAMII
ATIQRNLVVD ESMRGKSCRV FIRLASDGFV TTSQTLDGDQ VVCRAAKASI NKAGRLPVSP
EPAVYQQLKE INLTVSPEFN
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