| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1434 |
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| Symbol | |
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| ID | 4277251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1708152 |
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| End bp | 1709138 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638134208 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_750124 |
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| Protein GI | 114562611 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGAATAT CAGTCTCATT ATTTGAGTTT GACTTATTTG CCATTATCAG AGCAATCAAT
ATGAAAACCG AAGACATTGC CTTATTTCAC CGAATTGTCG AAACAGGCAG CATACTTGAA
GCGGCTAACT TATTGAATTT GCCTAAATCG ACGGTCAGCA GACGCTTGCA ATCGTTAGAA
GAGTCATTAA ATTTAAAGTT ATTTCATCGT CAAAGCCGGG CAATAACACT GACCTCTGCA
GGCAGTCATT TCTATGAAAA AACCTTGGTG ATGTTAGCTG ACTTAGACAG AACCCTTTCA
GATATCACCG ACAACAAAGC AGAGTTGACT GGCCACTTGC GGATTTTGAT ATTTCCTATC
CCACAGATAA TGGATATTGT GAGTAAAATA TTTGCCTTTA TGGATGAAAA TCCTAACTGT
TCGATTGAAA TTATTACCAG TACTGAGCCC TTAGACATGG TACGTAACAA TATTGATATC
GCGTTTATGG TGAATGAAAC GTTTAGTGAA CTCGACATGG TGGCAAAACC AGTTATCAGT
GAAGATATGT GTTTCTTTGC CAGCCCAGAA TACTTAACCA AAGCTGGCAT GCCTGTCACC
TTGAGTGATA TTGAACAACA CAACTCAATT CTATTTCGCT TCCCAAATGG TAAAACCTTC
AGTGAAGTTC CACTCGCCAA TGATGCAATG CAGGCCGTAA AAGGCAACTT ATGCACCAAC
AGCATTCAAC TGGCTTATGA AGCGACAAAA TTAGGCCGAG GGATAGGTTA TTTACCACAA
AAATTATGTC ACGATGACGT AGAGCAAGGG GAGTTAGTAC GTTTATTTAA TGATTTAGCG
CCTTATACAG GCGTGGTATT TCTAGTGTAT CCATCAAGAC GATTTTTAAG CCTAACGGGT
CAGCGCTTAC TCGATTACAT GCTCGCACAA CTACCCGTGC AAACCAGCGA AAAAACGACG
ACAACCAATA CTAAAGTGTG GATTTAA
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| Protein sequence | MGISVSLFEF DLFAIIRAIN MKTEDIALFH RIVETGSILE AANLLNLPKS TVSRRLQSLE
ESLNLKLFHR QSRAITLTSA GSHFYEKTLV MLADLDRTLS DITDNKAELT GHLRILIFPI
PQIMDIVSKI FAFMDENPNC SIEIITSTEP LDMVRNNIDI AFMVNETFSE LDMVAKPVIS
EDMCFFASPE YLTKAGMPVT LSDIEQHNSI LFRFPNGKTF SEVPLANDAM QAVKGNLCTN
SIQLAYEATK LGRGIGYLPQ KLCHDDVEQG ELVRLFNDLA PYTGVVFLVY PSRRFLSLTG
QRLLDYMLAQ LPVQTSEKTT TTNTKVWI
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