| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1431 |
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| Symbol | |
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| ID | 4277248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1705947 |
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| End bp | 1706567 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134205 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_750121 |
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| Protein GI | 114562608 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCAAT TTTTTTATAT TCATGATGAG AACCCACAAG CACGATTAAT TAATCAAGCA
GTGGCGATTC TTAAACAAGG TGGAGTCATT GTTTACCCAA CTGACTCAGG TTATGCATTG
GGCTGTATGA TTGGTGAAAA AAATGCCATG ACGCGTATGG CACGTATCCG CCAGATTGAA
AATGACACCA ATTTTTCATT AATGTGTCGT GATTTATCTG AGCTGGCTAA TTTTGCCCGC
GTTGATAACC AAGCATACCG TTTATTAAAA AGCTGTATGC CTGGCCCATA TACATTTATT
TTCAAAGCCA CTAAAGAAGT GCCACGCCGT TTACAGTGCG ATAAAAAGCG CACCATAGGC
ATTCGCGTAC CTAATAATAT TATTGCGCTC GCGTTACTTG AAGCATTGGG CGAACCAATG
ATGACCACCA GTTTAGTAAT GCCAAATGAG CAATTTGCTG AATCAGACCC AGAGCATATT
CGCGATATAC TCGATCACTT GGTCGACGGT ATTATTCACG GTGGTTATTT ACCTGAAAAT
CAAACGACAG TGATTGATAT GTCTGAAGAT GAGATGGTGA TATTACGTCA TGGTGCTGGC
GATACCAGTG CATTTGAATA A
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| Protein sequence | MSQFFYIHDE NPQARLINQA VAILKQGGVI VYPTDSGYAL GCMIGEKNAM TRMARIRQIE
NDTNFSLMCR DLSELANFAR VDNQAYRLLK SCMPGPYTFI FKATKEVPRR LQCDKKRTIG
IRVPNNIIAL ALLEALGEPM MTTSLVMPNE QFAESDPEHI RDILDHLVDG IIHGGYLPEN
QTTVIDMSED EMVILRHGAG DTSAFE
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