| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1425 |
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| Symbol | |
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| ID | 4277923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1698726 |
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| End bp | 1699937 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134199 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_750115 |
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| Protein GI | 114562602 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGC TCAAGCTTAA CCCTTATTTC GGCGAATACG GTGGGATGTA CGTACCGCAG
ATTTTAGTGC CTGCATTAAA ACAACTTGAA ACGGCCTTTG TTGAAGCACA ACAAGATGAA
AGCTTTATCG CTGAGTTCAC CGACCTGTTG AAAAACTATG CTGGCCGCCC AACAGCGCTA
ACACTTACTC GTAATTTAAG TCCAAATCCG CTGGTGAAAA TCTACCTAAA GCGTGAAGAC
TTACTCCACG GTGGTGCGCA TAAAACCAAC CAGGTATTAG GTCAGGCTTT GTTAGCTAAG
CGAATGGGTA AAAAAGAAAT CATTGCCGAA ACAGGCGCTG GCCAACATGG TGTGGCCACA
GCCCTAGCCT GTGCGCTTTT AGGCTTAAAA TGTAAAGTCT ACATGGGTGC AAAAGACATT
GAGCGTCAGT CTCCAAACGT ATTTAGAATG AAACTAATGG GCGCTGAGGT TATTCCAGTT
ACATCGGGTT CATCAACCTT AAAAGATGCC TGTAACGAAG CCATGCGCGA CTGGTCTGCA
AGTTATGATA AAGCGCATTA CTTATTAGGT ACAGCAGCCG GCCCGCACCC ATTCCCGACA
ATTGTGCGTG AATTCCAACG AATGATTGGT GAAGAAACCA AGAAACAAAT TCTTGAAAAA
GAAGGTCGTT TACCTGATGC CGTTATCGCG TGTGTAGGCG GTGGCTCGAA CGCTATAGGC
ATGTTTGCCG ACTTTATTGA CGAACCGTCA GTGGAATTAA TTGGTGTAGA ACCTGCTGGT
AAAGGCATTG ATACCCCGAT GCACGGCGCG CCGCTTAAAC ATGGTAAAAC CGGTATTTTC
TTTGGGATGA AATCACCCTT AATGCAAAAT AGCGACGGTC AAATTGAAGA GTCATATTCG
GTTTCAGCGG GGCTTGATTT CCCATCCGTT GGGCCACAAC ATGCGCATTT AAATGCCATT
GGTCGTGCTC GTTATGAGTC AGCAACCGAT GATGAAGCAC TTGAAATGTT TCAAACGCTC
GCTCGTTGCG AAGGGATTAT TCCTGCATTA GAGTCTGCCC ATGCCCTAGC CTATGCTGTA
CGCATGGCAA AAGAAGCCAC TAAAGAAACC ATTTTAGTGG TTAATTTATC CGGCCGTGGT
GACAAAGATA TCTTTACAGT GGCAGATATT TTAGAAGCCA AACAAAAACA ACAGGAGAGC
GGCAATGAGT AA
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| Protein sequence | MTELKLNPYF GEYGGMYVPQ ILVPALKQLE TAFVEAQQDE SFIAEFTDLL KNYAGRPTAL
TLTRNLSPNP LVKIYLKRED LLHGGAHKTN QVLGQALLAK RMGKKEIIAE TGAGQHGVAT
ALACALLGLK CKVYMGAKDI ERQSPNVFRM KLMGAEVIPV TSGSSTLKDA CNEAMRDWSA
SYDKAHYLLG TAAGPHPFPT IVREFQRMIG EETKKQILEK EGRLPDAVIA CVGGGSNAIG
MFADFIDEPS VELIGVEPAG KGIDTPMHGA PLKHGKTGIF FGMKSPLMQN SDGQIEESYS
VSAGLDFPSV GPQHAHLNAI GRARYESATD DEALEMFQTL ARCEGIIPAL ESAHALAYAV
RMAKEATKET ILVVNLSGRG DKDIFTVADI LEAKQKQQES GNE
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